Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq1059 102 6e-17 >seq1059 Length=4692 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| | || || || |||||||||||||| ||| | |||| ||| Sbjct 2334 ACCAAATGCAATGTTGATTCCTTCTGAATATTATAATCAGATAAAGTTCTTCCATCTTCC 2275 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 ||||| ||||||||||| ||||| | ||| || || | || | |||||||| ||| Sbjct 2274 AATTGCTTTCCTGCAAAAATCAATCTTTGTTGATCAGGTGGGATTCCTTCTTTGTCTTGG 2215 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 ||||| ||| || || ||| |||||| | | || || || | ||||| ||||| Sbjct 2214 ATTTTGGCTTTAACATTATCAATAGTATCAGAAGATTCAACTTCCAAAGTAATGGTTTTG 2155 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || || ||||| ||||| |||||||| Sbjct 2154 CCAGTCAAGGTCTTTACAAAGATTTGCAT 2126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354726894187596