Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1059 109 5e-19 >seq1059 Length=4692 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||||||| | ||| ||||| || || || || ||||| | |||| | ||||||| Sbjct 2334 ACCAAATGCAATGTTGATTCCTTCTGAATATTATAATCAGATAAAGTTCTTCCATCTTCC 2275 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 ||||| || || ||| |||| | || |||||||| || | ||||||||||| Sbjct 2274 AATTGCTTTCCTGCAAAAATCAATCTTTGTTGATCAGGTGGGATTCCTTCTTTGTCTTGG 2215 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| ||| || | ||| || ||| || ||| ||||| |||||||||||| Sbjct 2214 ATTTTGGCTTTAACATTATCAATAGTATCAGAAGATTCAACTTCCAAAGTAATGGTTTTG 2155 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || ||||| || || ||||| ||||||||| Sbjct 2154 CCAGTCAAGGTCTTTACAAAGATTTGCATT 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419527231417287