Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq10852 89.7 8e-14 seq8915 89.7 8e-14 >seq10852 Length=72272 Score = 89.7 bits (98), Expect = 8e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCAT---CGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGC 16488 ||| ||||||| | |||| ||| || || |||||||| || ||||| ||||| || Sbjct 22383 CGCCAAGCGTCTTACTCGCAAGGTTCTCCGCGACAACATCCAGGGTATCACTAAGCCCGC 22442 Query 16489 TATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC 16528 |||||| ||||| |||||||||||||| ||||||||| || Sbjct 22443 TATCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATC 22482 >seq8915 Length=3631 Score = 89.7 bits (98), Expect = 8e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCAT---CGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGC 16488 ||| ||||||| | |||| ||| || || |||||||| || ||||| ||||| || Sbjct 548 CGCCAAGCGTCTTACTCGCAAGGTTCTCCGCGACAACATCCAGGGTATCACTAAGCCCGC 607 Query 16489 TATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC 16528 |||||| ||||| |||||||||||||| ||||||||| || Sbjct 608 TATCCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATC 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79064477921811