Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1059 93.3 4e-14 >seq1059 Length=4692 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | |||||||| || || ||||| ||| | || || | ||| | ||||| Sbjct 2125 AATGCAAATCTTTGTAAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAATCTTC 2184 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || || | || ||| || || ||||||||||| || || || ||||| Sbjct 2185 TGATACTATTGATAATGTTAAAGCCAAAATCCAAGACAAAGAAGGAATCCCACCTGATCA 2244 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 ||||||| | |||| | || || ||| | ||||||| || ||| | | | || |||| Sbjct 2245 ACAAAGATTGATTTTTGCAGGAAAGCAATTGGAAGATGGAAG-AACTTTATCTGATTATA 2303 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 | ||||| || ||||| || | ||| |||| || | ||| | || ||| Sbjct 2304 ATATTCAGAAGGAATCAACATTGCATTTGGTTCTTCGCCTTCGTGGTGGA 2353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478592234075440