Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1059 131 1e-25 >seq1059 Length=4692 Score = 131 bits (144), Expect = 1e-25 Identities = 160/215 (74%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||||||||| ||||| || ||| |||| || | ||||| || || || Sbjct 2125 AATGCAAATCTTTGTAAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAATCTTC 2184 Query 25058 TGACACTATCGAGTCAC--TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||| ||||| || | | | |||| |||| || ||||||||||| || |||||||| Sbjct 2185 TGATACTATTGA-TAATGTTAAAGCCAAAATCCAA-GACAAAGAAGGAATCCCACCTGAT 2242 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | |||||||| || || ||||| ||||||| | ||| | ||||| Sbjct 2243 CAACAAAGATTGATTTTTGCAGGAAAGCAATTGGAAGATGGAAGAACTTTATCTGATTAT 2302 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || ||||| || | ||||| || || Sbjct 2303 AATATTCAGAAGGAATCAACATTGCATTTGGTTCT 2337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433266067543505