Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1059 118 9e-22 >seq1059 Length=4692 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||| ||||| || || |||| |||||||||||||| ||||| ||| | Sbjct 2125 AATGCAAATCTTTGTAAAGACCTTGACTGGCAAAACCATTACTTTGGAAGTTGAATCTTC 2184 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| || ||| | || ||| ||||| ||||||||||| | || ||||| Sbjct 2185 TGATACTATTGATAATGTTAAAGCCAAAATCCAAGACAAAGAAGGAATCCCACCTGATCA 2244 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||||| | |||| ||| || || |||||||||||| | |||| | | |||||||| Sbjct 2245 ACAAAGATTGATTTTTGCAGGAAAGCAATTGGAAGATGGAAGAACTTTATCTGATTATAA 2304 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| || || ||||| ||| | ||||| || | || || || ||||| Sbjct 2305 TATTCAGAAGGAATCAACATTGCATTTGGTTCTTCGCCTTCGTGGTGG 2352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422979537933400