Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq3694 102 7e-17 >seq3694 Length=8734 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || |||||||| ||| | |||||| |||||| || || || || Sbjct 3739 GTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTCGAGCTGCTTGCCG 3680 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| ||||| ||||| || ||||| || ||||| ||||| ||||| || Sbjct 3679 GCGAAGATAAGACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTG 3620 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| |||| || || || || | ||| | || ||||| || || || Sbjct 3619 ACGTTGTCGATGGTATCGGCGGGGTCAACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTC 3560 Query 114366 TTTACAAAAATCTGCATGGCTTAA 114389 || || ||||||||||||||| || Sbjct 3559 TTCACGAAAATCTGCATGGCTAAA 3536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420074353209924