Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3694 96.9 3e-15 >seq3694 Length=8734 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | |||||| || ||||| || || |||| Sbjct 3736 GACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCG 3677 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| ||||| || ||||| || ||||| ||||| ||| || || | Sbjct 3676 AAGATAAGACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTGACG 3617 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| |||| | || ||||||| || | || || || || || || || Sbjct 3616 TTGTCGATGGTATCGGCGGGGTCAACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTC 3557 Query 138601 ACAAAAATCTGCATGGCT 138618 || ||||||||||||||| Sbjct 3556 ACGAAAATCTGCATGGCT 3539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496189654135440