Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3694 96.9 3e-15 >seq3694 Length=8734 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||| | || | |||||||| || || || ||||| ||| Sbjct 3772 GCACCACCACGAAGACGGAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCG 3713 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || ||| || ||||| || || ||| |||| | || || ||||||||| Sbjct 3712 GAAAGAGTACGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGATCGGGA 3653 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || || |||||||| ||| || ||||| ||||| ||| ||| || | || Sbjct 3652 GGGATTCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTGT-CGATGGTATCGGCGGGGTC 3594 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || |||| ||| | || ||||| || || || || || ||||||||||||||| Sbjct 3593 AACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCATGGCT 3539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475431097526480