Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3694 136 9e-27 >seq3694 Length=8734 Score = 136 bits (150), Expect = 9e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| || || |||||||| |||| ||||||||| | | ||| Sbjct 3763 CGAAGACGGAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTA 3704 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| ||||||||||| ||||| || || || ||| |||||| Sbjct 3703 CGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGATCGGGAGGGATTCCT 3644 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| ||| |||| ||| || | | || || || | Sbjct 3643 TCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATGGTATCGGCGGGGTCAACCTCGAGG 3584 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || ||||| ||||| || Sbjct 3583 GTGATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTG 3546 Score = 91.5 bits (100), Expect = 3e-13 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 |||||||||||||| |||||| | |||||||| | ||| | |||| |||||| ||||| Sbjct 3669 CTTATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGTACTCTTTCCGACTACAACATCCAG 3728 Query 200995 AAAGAGTCTACTCTTCACCTTGT 201017 || |||||||| ||||||||||| Sbjct 3729 AAGGAGTCTACCCTTCACCTTGT 3751 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178744464450709