Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq1059 192 1e-43 >seq1059 Length=4692 Score = 192 bits (212), Expect = 1e-43 Identities = 172/216 (80%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| |||| ||||||||| | || || ||||||||| || ||||| ||||| | Sbjct 2340 CGAAGAACCAAATGCAATGTTGATTCCTTCTGAATATTATAATCAGATAAAGTTCTTCCA 2281 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || ||||| ||||| |||||||| ||||| ||||||||||| || ||||||||||| Sbjct 2280 TCTTCCAATTGCTTTCCTGCAAAAATCAATCTTTGTTGATCAGGTGGGATTCCTTCTTTG 2221 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 ||||| ||||||| ||| | ||| ||||||||| ||||| |||||||| | ||| || Sbjct 2220 TCTTGGATTTTGGCTTTAACATTATCAATAGTATCAGAAGATTCAACTTCCAAAGTAATG 2161 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| || || | || |||||||| ||||||||| Sbjct 2160 GTTTTGCCAGTCAAGGTCTTTACAAAGATTTGCATT 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899522521910640