Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1059 181 2e-40 >seq1059 Length=4692 Score = 181 bits (200), Expect = 2e-40 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 192310 CCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGAT 192369 ||||| | ||| || | || ||||| || || | || || ||||||||||||||| Sbjct 2352 CCACCACGAAGGCGAAGAACCAAATGCAATGTTGATTCCTTCTGAATATTATAATCAGAT 2293 Query 192370 AATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGT 192429 || |||| | |||| |||||||| || || ||||| || ||||| |||||||||||||| Sbjct 2292 AAAGTTCTTCCATCTTCCAATTGCTTTCCTGCAAAAATCAATCTTTGTTGATCAGGTGGG 2233 Query 192430 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACT 192489 ||||||||||| ||||| ||||| ||| |||||| |||| ||| || ||||| ||| Sbjct 2232 ATTCCTTCTTTGTCTTGGATTTTGGCTTTAACATTATCAATAGTATCAGAAGATTCAACT 2173 Query 192490 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 || | |||||||||||| ||||| || || || | ||| || |||||| Sbjct 2172 TCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTTACAAAGATTTGCATT 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984332079726450