Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1059 178 2e-39 >seq1059 Length=4692 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171843 CCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGAT 171902 ||||| | ||| || | || ||||| || || | || || |||||||||||| ||| Sbjct 2352 CCACCACGAAGGCGAAGAACCAAATGCAATGTTGATTCCTTCTGAATATTATAATCAGAT 2293 Query 171903 AAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGT 171962 |||| || | | || |||||||| || || |||||||| ||||| ||||| |||||||| Sbjct 2292 AAAGTTCTTCCATCTTCCAATTGCTTTCCTGCAAAAATCAATCTTTGTTGATCAGGTGGG 2233 Query 171963 ATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACT 172022 ||||||||||| ||||| ||||| ||| |||||| |||||||| || ||||| ||| Sbjct 2232 ATTCCTTCTTTGTCTTGGATTTTGGCTTTAACATTATCAATAGTATCAGAAGATTCAACT 2173 Query 172023 TCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 || | |||||||||||| ||||| || || || | || || |||||| Sbjct 2172 TCCAAAGTAATGGTTTTGCCAGTCAAGGTCTTTACAAAGATTTGCATT 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905003318376600