Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3694 114 8e-21 >seq3694 Length=8734 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||||| ||| ||||||||| ||||| ||||| || || | || |||| Sbjct 3754 AGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCT 3695 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || ||||| || || | || | || |||||||| Sbjct 3694 TCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCT 3635 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || || || || || | ||| |||||| Sbjct 3634 TGGATCTTAGCCTTGACGTTGTCGATGGTATCGGCGGGGTCAACCTCGAGGGTGATGGTC 3575 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||||||||||||| || || ||||||||| Sbjct 3574 TTGCCCGTGAGGGTCTTCACGAAAATCTGCATG 3542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325646251069013