Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1059 86.0 1e-11 >seq1059 Length=4692 Score = 86.0 bits (94), Expect = 1e-11 Identities = 97/132 (73%), Gaps = 11/132 (8%) Strand=Plus/Minus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 |||||||||| |||||||||||||||| |||||| | ||||| || ||| Sbjct 2318 ATTCCTTCTGAATATTATAATCAGATAAAGTTCTTCCATCTTCCAATTGCTTTCCTGCAA 2259 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | || | |||||||||| | || | ||| |||| || ||||| || || ||||| | || Sbjct 2258 AAATCAATCTTTGTTGATCAGGTGGGATTCCTTCTTTGTCTTGGATTTTGGCTTTAACAT 2199 Query 81760 TTTCAATCGTAT 81771 | ||||| |||| Sbjct 2198 TATCAATAGTAT 2187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903278771210720