Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1059 84.2 1e-11 >seq1059 Length=4692 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| | || || || || || || ||||| || | || | | | || ||| Sbjct 2334 ACCAAATGCAATGTTGATTCCTTCTGAATATTATAATCAGATAAAGTTCTTCCATCTTCC 2275 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 ||||| ||||| ||||||||||| | || ||||| | || | ||||||||||| Sbjct 2274 AATTGCTTTCCTGCAAAAATCAATCTTTGTTGATCAGGTGGGATTCCTTCTTTGTCTTGG 2215 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 ||||| | || ||||| || | || || ||||| || || | || || ||||| Sbjct 2214 ATTTT-GGCTTTAACATTATCAATAGTATCAGAAGATTCAACTTCCAAAGTAATGGTTTT 2156 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || || ||||||||||| ||||| Sbjct 2155 GCCAGTCAAGGTCTTTACAAAGATTTGCAT 2126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328657020699840