Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq7402 98.7 1e-14 >seq7402 Length=65217 Score = 98.7 bits (108), Expect = 1e-14 Identities = 126/171 (74%), Gaps = 6/171 (4%) Strand=Plus/Plus Query 724969 CCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG 725028 ||||| | ||||||||||| || ||| |||| ||| |||||||||||| ||||||||||| Sbjct 23077 CCATGGCTATCATGAACTCTTTCGTCCACGATATGTTCGACCGCATCGCCACCGAGGCCG 23136 Query 725029 GTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCA---CGCGCGAGATCCAGACCG 725085 | ||| || || || || ||||| | | || || | | ||||||| ||||| Sbjct 23137 CTTTCCTTGCTCG-TCGTAC--CCGCAAGTCTACCGTCACCTCTCACGAGATCATGACCG 23193 Query 725086 CCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGG 725136 |||| || ||| | | ||| || || |||| |||||| ||||||||| Sbjct 23194 CCGTCAAGCTTATCCTCCCCGGTGACCTTGCCAACCACGCCATCTCCGAGG 23244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176680109295774