Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3694 105 7e-18 seq1059 95.1 1e-14 >seq3694 Length=8734 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || || || ||||| || |||||||||||| || || | Sbjct 3760 AGACGGAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGG 3701 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| || || || | ||| || |||||||| || || ||||| Sbjct 3700 CCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGATCGGGAGGGATTCCTTCC 3641 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || ||||| ||| | || |||| | || || ||||| || Sbjct 3640 TTGTCTTGGATCTTAGCCTTGACGTTGTCGATGGTATCGGCGGGGTCAACCTCGAGGGTG 3581 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || || |||||||| ||||| Sbjct 3580 ATGGTCTTGCCCGTGAGGGTCTTCACGAAAATCTGCAT 3543 >seq1059 Length=4692 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 || |||||||| ||||| || || || | || | | | | || || | || || || Sbjct 2322 GTTGATTCCTTCTGAATATTATAATCAGATAAAGTTCTTCCA-TCTTCCAATTGCTTTCC 2264 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 |||||||||||| | || ||||| || || || |||||||| ||||| ||||| ||| Sbjct 2263 TGCAAAAATCAATCTTTGTTGATCAGGTGGGATTCCTTCTTTGTCTTGGATTTTGGCTTT 2204 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 || || | || || || ||||| || || | |||||||||||| || || || || Sbjct 2203 AACATTATCAATAGTATCAGAAGATTCAACTTCCAAAGTAATGGTTTTGCCAGTCAAGGT 2144 Query 134696 TTTAACGAAAATTTGCATT 134714 || || || ||||||||| Sbjct 2143 CTTTACAAAGATTTGCATT 2125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505324314912040