Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3694 84.2 2e-11 >seq3694 Length=8734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||| | | || | ||||||||||| || ||| Sbjct 3739 GTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTCGAGCTGCTTGCCG 3680 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || ||||| |||||||| || || | || || || || |||||| || Sbjct 3679 GCGAAGATAAGACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTGGATCTTAGCCTTG 3620 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | || ||||| || || || || | |||||||| || || Sbjct 3619 ACGTTGTCGATGGTATCGGCGGGGTCAACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTC 3560 Query 27231 TTCACAAAGATTTGCATAGCT 27251 ||||| || || ||||| ||| Sbjct 3559 TTCACGAAAATCTGCATGGCT 3539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424873667180424