Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq1059 93.3 3e-14 >seq1059 Length=4692 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||||| |||||||| || |||||||| ||||| | | |||| | ||||||| Sbjct 2334 ACCAAATGCAATGTTGATTCCTTCTGAATATTATAATCAGATAAAGTTCTTCCATCTTCC 2275 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 ||||| || || ||| | || | |||||||| || || | ||||||||||| Sbjct 2274 AATTGCTTTCCTGCAAAAATCAATCTTTGTTGATCAGGTGGGATTCCTTCTTTGTCTTGG 2215 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 ||||| ||| |||| | | || || | || ||| | ||||| |||||| Sbjct 2214 ATTTTGGCTTTAACATTATCAATAGTATCAGAAGATTCAACTTCCAAAGTAATGGTTTTG 2155 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCATTA 101240 || ||||| || || | ||| |||||||||| Sbjct 2154 CCAGTCAAGGTCTTTACAAAGATTTGCATTA 2124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409602250126293