Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3694 127 5e-24 >seq3694 Length=8734 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| ||||| ||||| |||||||| || ||||||||||| |||| | ||| | ||||| Sbjct 3755 GAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATC 3696 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || |||||||||||||| | || || || | | |||||||||||| || Sbjct 3695 TTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGATCGGGAGGGATTCCTTCCTTGTC 3636 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || ||||| | || | | | || | || || || || || || || Sbjct 3635 TTGGATCTTAGCCTTGACGTTGTCGATGGTATCGGCGGGGTCAACCTCGAGGGTGATGGT 3576 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||||| ||||||||||| | |||||| Sbjct 3575 CTTGCCCGTGAGGGTCTTCACGAAAATCTGCAT 3543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153647435900817