Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eukaryota_20sp._20EH-2015_20[genbank_20GCA_5F001655205.1_202016-06- 03] 11,727 sequences; 48,996,813 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3694 129 4e-25 >seq3694 Length=8734 Score = 129 bits (142), Expect = 4e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| || |||||| ||||||||||| |||| || || | || || Sbjct 3752 CACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTC 3693 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | ||| || ||||| | ||| | |||||||| || Sbjct 3692 GAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGATCGGGAGGGATTCCTTCCTTGTCTTG 3633 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | ||||| ||||||| || ||||| | || || ||||| Sbjct 3632 GATCTTAGCCTTGACGTTGTCGATGGTATCGGCGGGGTCAACCTCGAGGGTGATGGTCTT 3573 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||||||||||||||| || |||||| Sbjct 3572 GCCCGTGAGGGTCTTCACGAAAATCTGCATG 3542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359938949159559