Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=4772237 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||| || | || | ||||| ||||| || ||||| ||||||| Sbjct 1125475 CCACCACGCAGGCGGAGGACAAGGTGGAGGGTGGAGTCCTTCTGGATGTTGTAGTCCGAG 1125416 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| ||||| || |||| || | |||||| || ||| Sbjct 1125415 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGGGGG 1125356 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGC--CGACAGTATCACCGGGCTCCG 21126 | || |||||||| ||||| || || ||| ||| | ||| |||||| Sbjct 1125355 ATACCCTCCTTGTCCTGAATCTTAGCCTTGAC--GGCATCGATGGAGTCAGAGGGCTCGA 1125298 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| |||||||||||||| | || ||||| || || ||||| Sbjct 1125297 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1125249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258098695224