Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq12 123 5e-23 seq7 86.0 1e-11 >seq12 Length=745128 Score = 123 bits (136), Expect = 5e-23 Identities = 103/126 (82%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 254205 CCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCC 254264 ||||| ||||||||| | |||||||||||||||||| |||||||||||||||||||| || Sbjct 555836 CCGCCCTTCAAGCTCATCATCCTGGACGAGGCGGACTCCATGACGGCCGACGCGCAGGCC 555777 Query 254265 GCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAAC 254324 ||||| ||||| ||| ||| | | || |||||| || ||||||||||||||| Sbjct 555776 GCCCTGCGCCGTGTGATCGAGGTGAATGCCCGCACGACGCGCTTCTGCCTGGTGTGCAAC 555717 Query 254325 TACGTG 254330 || ||| Sbjct 555716 TATGTG 555711 >seq7 Length=2157034 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 157274 TTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATGTCCATCCACTCGAATGGGTTG 157333 ||||| || ||||||||||| ||||||||| ||||||||||| | ||||| ||||| Sbjct 326952 TTCTCGAAGAAGTTGGTCTTGCCCTGGAGACTGATCATGTCCATGAAGTCGAAGGGGTTC 326893 Query 157334 GCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTCAGCCAGTAGTCCGCCACAAACTTG 157393 | |||||| ||||| | | || |||| |||| | ||| |||||||||| | Sbjct 326892 TCCGCGTTGTAGACCTTCGGGCAGCCGAGCTCCACCAGCAGGCGGTCGGCCACAAACTCG 326833 Query 157394 ATGTACT 157400 ||||||| Sbjct 326832 ATGTACT 326826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073763455866752