Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq7 262 4e-65 seq5 253 2e-62 >seq7 Length=2157034 Score = 262 bits (290), Expect = 4e-65 Identities = 589/874 (67%), Gaps = 13/874 (1%) Strand=Plus/Plus Query 57528 AATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAA 57587 || ||||| | || ||| | || || || || || | || |||||| | |||||||| Sbjct 326084 AACCCCCGGCGCTTCGTCCTCTTCCCCATCGAGTACCATGAGATTTGGCAGATGTACAAG 326143 Query 57588 AAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGAT 57647 ||||| || || || || ||||||| ||| || || ||||| || || ||| ||| Sbjct 326144 AAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAGGTGGACCTCTCCCGCGACCTGGACGAC 326203 Query 57648 TGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTC 57704 ||| | | || | | ||| | | || || || ||| ||||||| ||| Sbjct 326204 TGGAACAACAAGCTGACCGCCAACGAGCGGTACTTCATCTCCCATGTGCTGGCGTTCTTC 326263 Query 57705 GCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAA 57764 ||||| || ||||| ||||| || |||||| ||||| | | || || || ||||| Sbjct 326264 GCCGCGTCGGATGGCATTGTCAATGAGAATCTGGTCAACCGGTTCTCCTCGGAGGTGCAG 326323 Query 57765 GTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAA 57824 | | ||||| | ||||| ||||| || || | ||||| || ||| | || || Sbjct 326324 ATCGCCGAGGCCCGGTGCTTCTACGGCTTCCAGATCGCCATCGAGAACATCCACAGCGAG 326383 Query 57825 ATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGAC-TGTT 57883 ||||| ||||| || || || || || ||| ||| | |||| || || | || Sbjct 326384 ATGTACTCGCTGCTGATTGACACCTATGTGCGGGATGTGGCCGAGCG-CGACCACCTCTT 326442 Query 57884 CAACGCGATCGAAACAATGCCC-GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGA 57942 | ||| ||||| || || ||| ||| || |||||||| || ||| | || |||| Sbjct 326443 CGGCGCCATCGAGACCATCCCCTGCG-TCAAGAAGAAGGCCGACTGGGCCATGCGCTGGA 326501 Query 57943 TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTA 58002 | | || || |||| |||||| | | || | || ||||||||||| || || | Sbjct 326502 TCGAGGACGAGTCGTCCACCTTCGCCACGCGCCTGGTGGCCTTCGCCGCCGTGGAGGGCA 326561 Query 58003 TATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCG 58062 | ||||| || ||| ||| || || || || ||| ||||||| |||||||| ||||||| Sbjct 326562 TTTTCTTCTCCGGCTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCG 326621 Query 58063 GCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGT 58122 | ||||| || ||||| ||| | || || || |||||||| ||||| || || |||| Sbjct 326622 GGCTGACCTTCAGCAATGAGCTCATCTCCCGTGACGAGGGGCTCCACTGCGACTTCGCGT 326681 Query 58123 GCCTAATGTACTCTCACATTGTCAATAAACCGACGCG-GGATCGCATCTTGGACATTATC 58181 |||| | | ||| ||| | | || | ||| || |||| | | | ||| Sbjct 326682 GCCTGCTCTTCTCGCACCTGAACTCCCGGCCCA-GCGTGGCCACCATCACCGCCCTCATC 326740 Query 58182 ACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTC 58241 | ||||||||| | ||||| || ||||| ||||||| ||||| || || | || || Sbjct 326741 AGCGAGGCGGTGGTCATCGAGAAGGAGTTCCTCACCGAGGCCCTGCCCGTTCGCCTGATC 326800 Query 58242 GGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTC 58301 || |||||| || | |||| ||||||| |||||||| |||||| | || || | Sbjct 326801 GGCATGAACGGCGACCTCATGTGCCAGTACATCGAGTTTGTGGCCGACCGCCTGCTGGTG 326860 Query 58302 GAACT--GATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGA 58359 || || | | || ||| |||||| || | || || || || || ||| | ||| Sbjct 326861 GAGCTCGGCTGCCCGAAGGTC--TACAACGCGGAGAACCCCTTCGACTTCATGGACATGA 326918 Query 58360 TCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 || ||| |||||||||| ||||| ||||| || Sbjct 326919 TCAGTCTCCAGGGCAAGACCAACTTCTTCGAGAA 326952 >seq5 Length=2316015 Score = 253 bits (280), Expect = 2e-62 Identities = 577/863 (67%), Gaps = 4/863 (0%) Strand=Plus/Plus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 ||| || ||||| || ||||| |||||||||||||| ||| ||||||| || || || Sbjct 1115883 GGCAATGGAGGCCAGGTTGCACACGGCCACCTCGTCGTTGCTGGTGTACTGGACGATCTC 1115942 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 ||| || || || ||||| || || || | || |||||||| || | ||||| Sbjct 1115943 GGTGCAGAGGTTCGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGGACTTCTGGTTGCA 1116002 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 | ||||||||| | ||| | || ||||| ||||| ||||| | ||| |||||| || Sbjct 1116003 GGCATCCTTGTACATGATGAAGGGGGTGCCGGTCTCCACCTGGGCCTCCATGATCTTGCG 1116062 Query 23200 CCACATAGTCTGAGCGTGAAC-ACGTCGCACGTACCTGCCTTCTTCCTCGTACTTTTGGT 23258 ||||| ||| || | | || | || | || ||| | |||||| |||| Sbjct 1116063 CCACAGCAGCTGGGCCTTCATGACCTTGCGGGCACGCCCCT-CGGACTCGTAACGCTGGT 1116121 Query 23259 ACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACA 23318 | | | || || || | || || || ||| |||||| || | | ||| || | Sbjct 1116122 AGAGGGTCTCGAACTCCTCGCCATAGCACTCGTGCAGGCCCGGGGCCTCGCGCGGGCAGA 1116181 Query 23319 TGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAG 23378 || ||| | | || ||||| |||| ||||||||||| | ||| || | Sbjct 1116182 ACAGCGACCAGTCGCCGCCGGACTCCACGCGCTTCATGAAAAGATCCGGCACCCACAGGG 1116241 Query 23379 CGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAA 23438 | |||| || || ||||| || |||||| |||||||||||| || || | | Sbjct 1116242 CAAAGAAGAGGTCACGGGCACGAGTCTCCTCGGCGCCGGTGTTCTTGCGCAGCTCGATGA 1116301 Query 23439 AGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTAT 23498 || | ||| ||||| ||||| ||||| ||||| | |||||||||||| || | ||| | Sbjct 1116302 AGGACTCCACATCCGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCGCCGGGGCGCTTGT 1116361 Query 23499 TGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGAC 23558 |||| ||||| ||||||||||| || ||| ||| |||| | |||||||| || || | Sbjct 1116362 TGCCACCCTGGTCGACGTAACGCGCGGTGGCATTGAACACACGCAGCATCGGGACCAGCC 1116421 Query 23559 CGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGT 23618 ||||||| ||| ||| || | || || | || || | ||||||||| | Sbjct 1116422 CGTTGGAGTAGCCATTGGTGCCGGCAATGTAGGACCCGGTGGCGCGGATGTTGTGAACAT 1116481 Query 23619 GGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGA 23678 || || ||||| ||| | | || || || | ||||| || ||| |||||||| | Sbjct 1116482 TGAGGCCGATGCCGCCGGCGGTCTTGGAAATGAGGGCGCACTGGCGCAGGGTGTCGTAAA 1116541 Query 23679 TGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGG 23738 |||| || || ||| || || | | || || ||| || || |||| |||| || Sbjct 1116542 TGCCATCAATCGAGTCGTCCTTCATGGTGAGCAGGAAGCAAGACGACAGCTGCGGCCGGG 1116601 Query 23739 GCGTAGCGGCCG-AGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGA 23797 | | | | | | ||| || ||||| ||| ||||| ||||| | | ||||| Sbjct 1116602 GAG-ACCCACAGTTGAAGAGGGTCGGCGAGGCATGCGTGAAGTAGCGCTGGGACATGTAC 1116660 Query 23798 TTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATC 23857 | ||| || || | |||||| ||||| || || || |||| ||| |||||||| Sbjct 1116661 TCGTAGGTCTCCAGGGCGGCGGGGATGTCGCTGCCATGGATGCCGACGGCCACGCGCATG 1116720 Query 23858 ATCATGTATTGAGGTCTCTCGAC 23880 |||||||| || || | |||||| Sbjct 1116721 ATCATGTACTGCGGGCGCTCGAC 1116743 Score = 163 bits (180), Expect = 3e-35 Identities = 505/776 (65%), Gaps = 9/776 (1%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || |||| ||||| | || || || |||||||| || ||||||||||| Sbjct 1114956 CTGGTCAACCGTGAACTTGATGGCCTCGGCCGCGGGCTTGGTGCGCAGGTAATACATGCC 1115015 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| || ||| ||||||| | || || || || || ||||| | | || Sbjct 1115016 GGTCTTGAGGCCCTTCTTCCAGCCATAGAAGTGCATGGAAGTCAACCGGCTGGCGGTGGG 1115075 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | | | ||| | | || | ||| ||||||||||| || || || || |||||||| Sbjct 1115076 CTCGCCGATGAAGATGTTCAGGCTCTGGCTCTGATCGATGAAGGCACCCCGGTCGGCGGC 1115135 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | || | | ||| || ||||| ||||||||| || | | | || Sbjct 1115136 CATGTCGATGATGGACCGCTGGCTGATCTCCCAGGTGGTCTTGTAGAGGGCCTTCAGGTC 1115195 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 || || || | || ||||||||| || | ||||||| | | Sbjct 1115196 ATCGGGGATGGAAGGCACCCGCTGGACGGAGCCACCGGCGGCGATGATCATCTGCCGGAC 1115255 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 | || ||||||| || ||| | | || |||| ||| || |||| |||| || Sbjct 1115256 ATTGTCATTCCACACCCCAATGCGAATGAGGTCCTTGATCAGGTGGGGGTTGACCATCTG 1115315 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||||| ||||||| || || || || |||||||| ||| | || |||| | || Sbjct 1115316 GAACTCCCCGGACAGCACACGACGGACATAGATGTTGGAGGTGTAGGGCTCGATGCACTC 1115375 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 |||| || || ||||| | ||| || || ||||||||||| |||| ||| |||||||| Sbjct 1115376 ATTGAAGCCGAGGATCTGCGAGGTGGAGGCCGTCGGCATCGGGGCCACCAGGAGCGAGTT 1115435 Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGG 22644 | || ||| || | ||| ||| || | ||| |||||| | ||||| || Sbjct 1115436 ACGCAGGCCATGACGAGCAATGCGCTCCTTCAGGCCGGCCCAATCCCACCGGTCGGAGGG 1115495 Query 22645 CGTCACATTGTCCCACATATCGTATTGCAACACGCCG--CGACTCGCCGGGCTGCCTTCG 22702 |||||| |||||| ||| | || | | |||| ||| |||||| || ||| Sbjct 1115496 GGTCACA---CCCCACAGGTCGAACTGGAGCTGGCCGGCCGA--AGCCGGGGACCCCTCG 1115550 Query 22703 TACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAA 22762 |||| | ||||| || | |||| | |||| |||||| | ||| || | Sbjct 1115551 TACGAGGCATACGGGCCGACGCGCTCGGCCGTCTGGCAGGACGCCTCGACCGCCGCGAAG 1115610 Query 22763 TATATAGTCTCGAAGATTTTCTTGTTCAATTC-GGCGGCGGCGACGCTTTCGTACGGCAT 22821 || || ||||||||||| |||||| | | ||| | || ||| ||| ||||||| Sbjct 1115611 TAGATGGTCTCGAAGATGGCCTTGTTGAGGGCACGCGCCTCCG-GGCTCTCGAACGGCAT 1115669 Query 22822 ACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 |||||||| | |||| || |||| ||||| || || || || ||||| |||| Sbjct 1115670 GCGCATCATGATGAACAGATCGGCCAGGCCCTGGACACCGATGCCAATCGGCCGGT 1115725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765207574880