Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq2 136 3e-27 >seq2 Length=3916072 Score = 136 bits (150), Expect = 3e-27 Identities = 171/235 (73%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 20924 CAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCC 20983 ||| | |||||| ||||| ||||| || |||| |||||||| | |||| | | || || Sbjct 3896350 CAGCGCATCAACATGGTTCTTGTACACATGGGTGTCACCCATGATGTGGATCAGCTCACC 3896291 Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043 ||| ||||| ||| || || ||||| ||||||| || || |||||||||||||| Sbjct 3896290 CGGCCGGAGGCCAGTGCAATGGGCAATCAGGCACGTCAGCAGCGCATAGCTGGCGATGTT 3896231 Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCC 21103 || || || ||||| || | || || | |||||| | ||||||||||||||| || Sbjct 3896230 GAATGGCACACCGAGCCCAAGATCACACGAGCGCTGGTAGAACTGGCAGGACAGCTCGCC 3896171 Query 21104 CCGAGC------CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 || | |||||||||||| || | ||| || ||||||||||||||| Sbjct 3896170 ACGCTCGATGTTCACGTAAAACTGGGCCATCAGGTGGCAGGGAGGGAGAGCCATC 3896116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774884306720