Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2 111 1e-19 seq7 89.7 4e-13 >seq2 Length=3916072 Score = 111 bits (122), Expect = 1e-19 Identities = 129/169 (76%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 33553 CTGCGCAAGATACGCATACCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAA 33611 ||||| || || ||||| || |||| |||||||||||||| ||| |||||| ||||| Sbjct 915172 CTGCGGAATATCCGCATCCCGCAGATCGGCGACAAGTTTGCCTCGCGTCACGG-GCAGAA 915230 Query 33612 GGGCA-CGTGCGGCATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGG 33670 ||||| |||| ||||| | ||| ||| ||||||||| ||||| | || ||| | | Sbjct 915231 GGGCACCGTG-GGCATCACCTACCGGCAGGAGGACATGCCCTTCACAGAGGAGGGCATTG 915289 Query 33671 TCCCGGACCTAGTCATCAACCCGCATGCGTTCCCCTCGCGCATGACGGT 33719 | |||||||| ||||||| || ||||| | || ||||| ||||| || Sbjct 915290 TGCCGGACCTGATCATCAATCCCCATGCCATTCCTTCGCGAATGACCGT 915338 >seq7 Length=2157034 Score = 89.7 bits (98), Expect = 4e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 22733 TCGCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTG 22792 |||| || || || ||||||| || || || || ||| | | || || || || || | Sbjct 326523 TCGCCACGCGCCTGGTGGCCTTCGCCGCCGTGGAGGGCATTTTCTTCTCCGGCTCCTTCG 326582 Query 22793 CGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGT 22852 | ||||| |||||||||||||| || |||||||| ||| || | || ||| ||| Sbjct 326583 CCGCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGGCTGACCTTCAGCAATGAGC 326642 Query 22853 TGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901 | || ||||||||| || || ||||| ||||| || || |||| || Sbjct 326643 TCATCTCCCGTGACGAGGGGCTCCACTGCGACTTCGCGTGCCTGCTCTT 326691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232670898242