Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq7 104 2e-17 >seq7 Length=2157034 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||| || | ||| || || ||||| | || || || | ||||| || | ||| Sbjct 326744 GAGGCGGTGGTCATCGAGAAGGAGTTCCTCACCGAGGCCCTGCCCGTTCGCCTGATCGGC 326803 Query 52897 ATGAACG-CGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955 ||||||| ||||| | |||||| |||||||||||||||| || ||| | ||| || || | Sbjct 326804 ATGAACGGCGACC-TCATGTGCCAGTACATCGAGTTTGTGGCCGACCGCCTGCTGGTGGA 326862 Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 |||||| ||||| ||| || ||| |||||||| || ||| ||| || Sbjct 326863 GCTCGGCTGCCCGAAGGTCTACAACGCGGAGAACCCCTTCGACTTCATGGACATGATCAG 326922 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||| ||||||| || ||||| ||||||| || || || || ||| Sbjct 326923 TCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTAC 326968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062673028800