Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 147 3e-31 >seq8 Length=1859391 Score = 147 bits (162), Expect = 3e-31 Identities = 180/243 (74%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| | || || || |||||||||| ||||||||||| || | Sbjct 1115375 CGCCAAGCGTCACCGCAAGGTC-CTCCGCGATAACATCCGCTCCATCACCAAGCCCGCCA 1115433 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||||||||||||||| ||||||||| |||| | | |||| || |||| Sbjct 1115434 TCCGCCGTCTGGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCCCTCATCTACGAGGAGA 1115493 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || || | |||||||||||| ||| ||| ||| || | || ||| |||| Sbjct 1115494 CCCGCTCCGTCCTCAAGATCTTCCTCGAGAACGTCGTCCGCGACTCCGTCACCTACACCG 1115553 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| |||||| ||| ||| | ||||| || | || || || | Sbjct 1115554 AGCACGCCAAGCGCAAGACCGTCACCGCCACCGATGTGGTCTACGCTCTCAAGCGCCAGG 1115613 Query 16671 GCC 16673 ||| Sbjct 1115614 GCC 1115616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075004338302