Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5 206 7e-48 >seq5 Length=2316015 Score = 206 bits (228), Expect = 7e-48 Identities = 591/891 (66%), Gaps = 32/891 (4%) Strand=Plus/Minus Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 |||| || ||||||||| | ||| | ||||| || || | || |||||| || || Sbjct 1116745 TTGTCGAGCGCCCGCAGTACATGATCATGCGCGTGGCCGTCGGCATCCATGGCAGCGACA 1116686 Query 363503 TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCAC 363560 | ||||| | || || || || | | || | | | || |||||||| ||| | Sbjct 1116685 TCCCCGCCGCCCTGGAGACCTACGAG--TACATGTCCCAGCGCTACTTCACGCATGCCTC 1116628 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAA 363620 ||| || | | ||| ||| ||| || ||| |||| |||||||| || || | Sbjct 1116627 GCCGACCCTCTTCAACTGTGGGTCTCCCCGGCCGCAGCTGTCGTCTTGCTTCCTGCTCAC 1116568 Query 363621 AATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTC 363680 ||||||||||| || || || || || | ||||| || | || || || ||||| Sbjct 1116567 CATGAAGGACGACTCGATTGATGGCATTTACGACACCCTGCGCCAGTGCGCCCTCATTTC 1116508 Query 363681 CAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGT--TA 363737 ||||| || ||||| || || | | ||||| | || || || | || || Sbjct 1116507 CAAGACCGCCGGCGGCATCGGCCTCAATGTTCACAACATCCGCGCCACCGG---GTCCTA 1116451 Query 363738 CATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797 |||| |||||| || ||||| || |||||||| || ||||| |||||||| ||| Sbjct 1116450 CATTGCCGGCACCAATGGCTACTCCAACGGGCTGGTCCCGATGCTGCGTGTGTT---CAA 1116394 Query 363798 T---ACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | || ||| | ||||||||||||||||| |||||| || |||||||| || || Sbjct 1116393 TGCCACCGCGCGTTACGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCGTTTGCCATCTA 1116334 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGT--TTC-TTGAGCTCCGGAAAAACACGGG 363911 || ||||| || || || | | |||| ||| | ||||| || || ||||| || Sbjct 1116333 CCTGGAGCCCTGGCACGCGGA---TGTGGAGTCCTTCATCGAGCTGCGCAAGAACACCGG 1116277 Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971 ||||| ||||| ||||| || |||| ||| || ||||| | || | ||| || Sbjct 1116276 CGCCGAGGAGACTCGTGCCCGTGACCTCTTCTTTGCCCTGTGGGTGCCGGATCTTTTCAT 1116217 Query 363972 GAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCT 364031 ||||||||||||| | || | ||||| || || ||||| | ||| || || || Sbjct 1116216 GAAGCGCGTGGAGTCCGGCGGCGACTGGTCGCTGTTCTGCCCGCGCGAGGCCCCGGGCCT 1116157 Query 364032 TTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGA 364089 ||| || ||| || || || | | | || ||| | || || || ||||| Sbjct 1116156 GCACGAGTGCTAT--GGCGAGGAGTTCGAGACCCTCTACCAGCGTTACGAGTCCGAGGGG 1116099 Query 364090 AAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATT 364149 || || ||| || || ||| ||| ||| |||||||| | ||| | Sbjct 1116098 CGTGCCCGCAAGGTCATGAAGGCCCAGCTGCTGTGGCGCAAGATCATGGAGGCCCAGGTG 1116039 Query 364150 GAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAG 364209 ||||| || || |||| || ||||||| ||| | ||||||| |||||||||||| || Sbjct 1116038 GAGACCGGCACCCCCTTCATCATGTACAAGGATGCCTGCAACCAGAAGTCCAACCAGAAG 1115979 Query 364210 CACCTTGGTACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCT 364266 |||| ||||| | ||| || || ||||| || |||||||| | | |||||| Sbjct 1115978 AACCTCGGTACCA-TCA--AGTGCTCGAACCTCTGCACCGAGATCGTCCAGTACACCAGC 1115922 Query 364267 CCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTT 364317 ||||||| ||||| || ||||| || || || || || ||| |||| Sbjct 1115921 AACGACGAGGTGGCCGTGTGCAACCTGGCCTCCATTGCCCTGCCGCAGTTT 1115871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350026367348