Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3 123 2e-23 seq1 102 7e-17 >seq3 Length=3619281 Score = 123 bits (136), Expect = 2e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| ||||| || | |||||||| || |||| ||||| || || || | Sbjct 1037527 ATGCAGATTTTCGTTAAGACCCTTACCGGTAAGACCATCACCCTTGAGGTTGAGCCCTCT 1037468 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | |||| |||| || ||||| |||||||||||||| || || ||||| Sbjct 1037467 GACTCGATCGACGCCGTCAAGGCTAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCAG 1037408 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | |||||| ||||||| ||||||| |||||| Sbjct 1037407 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTCTCCGACTACAAC 1037348 Query 22399 ATTCAAAA 22406 || || || Sbjct 1037347 ATCCAGAA 1037340 >seq1 Length=4772237 Score = 102 bits (112), Expect = 7e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || || || | ||||| || || |||| || || || || || | Sbjct 1125248 GATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCCTC 1125307 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 || || | || | |||| || ||||| |||||||||||||| || || ||||| Sbjct 1125308 TGACTCCATCGATGCCGTCAAGGCTAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCA 1125367 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || || || || || |||||||| ||| | ||||| ||| ||| |||| || ||||| Sbjct 1125368 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCGGACTACAA 1125427 Query 22398 CATTCAAAAAGAATCCACC 22416 ||| || || || |||||| Sbjct 1125428 CATCCAGAAGGACTCCACC 1125446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726905296910