Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 109 1e-18 seq7 86.0 1e-11 >seq1 Length=4772237 Score = 109 bits (120), Expect = 1e-18 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| || || ||||| || ||||| | | Sbjct 1125475 CCACCACGCAGGCGGAGGACAAGGTGGAGGGTGGAGTCCTTCTGGATGTTGTAGTCCGAG 1125416 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || ||||| ||||| ||||| ||| | ||| Sbjct 1125415 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGGGGG 1125356 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || || ||| || || || || | || || Sbjct 1125355 ATACCCTCCTTGTCCTGAATCTTAGCCTTGACGGCATCGATGGAGTCAGAGGGCTCGACC 1125296 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 ||||| ||||| ||||| ||||| || ||||||||||| |||||||| |||| Sbjct 1125295 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATCCTGTT 1125243 >seq7 Length=2157034 Score = 86.0 bits (94), Expect = 1e-11 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 269150 TGATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCT 269209 ||||||| ||||| | ||| |||||| || || ||||| || ||||| || || | Sbjct 326796 TGATCGGCATGAACGGCGACCTCATGTGCCAGTACATCGAGTTTGTGGCCGACCGCCTGC 326855 Query 269210 TCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269 | || ||||| | ||| || ||||| || |||| ||||||| ||| ||||| Sbjct 326856 TGGTGGAGCTCGGCTGCCCGAAGGTCTACAACGCGGAGAACCCCTTCGACTTCATGGACA 326915 Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCA 269324 | || ||| | || ||||| ||||||||||| ||||| ||| | ||||| || Sbjct 326916 TGATCAGTCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTACCA 326970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651165535092