Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5 383 2e-101 >seq5 Length=2316015 Score = 383 bits (424), Expect = 2e-101 Identities = 1105/1684 (66%), Gaps = 38/1684 (2%) Strand=Plus/Minus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | |||||||| |||||| ||| | || ||| ||| |||| || || |||||| Sbjct 1116632 GCCTCGCCGACCCTCTTCAACTGTGGGTCTCCCCGGCCGCAGCTGTCGTCTTGCTTCCTG 1116573 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | || | |||| |||||| || || |||| ||||| ||| | | ||||| || Sbjct 1116572 CTCACCATGAAGGACGACTCGATTGATGGCATTTACGACACCCTGC--GCCAGTGCGCCC 1116515 Query 94012 --ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTT 94069 || || || ||| || || ||||| ||| ||| ||| || | || |||| || | Sbjct 1116514 TCATTTCCAAGACCGCCGGCGGCATCGGCCTCAATGTTCACAACATCCGCGCCACCGGGT 1116455 Query 94070 CCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCA 94129 ||||||| ||| ||||||||| ||||||||| || ||||| ||||| || || |||| Sbjct 1116454 CCTACATTGCCGGCACCAATGGCTACTCCAACGGGCTGGTCCCGATGCTGCGTGTGTTCA 1116395 Query 94130 ACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCT 94189 | | | ||||| ||||| ||||||||||| | | | || | || || ||| Sbjct 1116394 ATGCCACCGCGCGTTACGTCGACCAGGGTGGCAACAAGCGCCCCGGCGCGTTTGCCATCT 1116335 Query 94190 ATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCA 94249 | || ||||||||||||||||| ||| || | |||||||| ||||| |||||| |||| Sbjct 1116334 ACCTGGAGCCCTGGCACGCGGATGTGGAGTCCTTCATCGAGCTGCGCAAGAACACCGGCG 1116275 Query 94250 ACGATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 ||| ||||| | ||| | |||||||||| || || |||||||| || ||||| | Sbjct 1116274 CCGA---GGAGACTCGTGCCCGTGACCTCTTCTTTGCCCTGTGGGTGCCGGATCTTTTCA 1116218 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| ||||| ||| | || |||| || || || || || || || | Sbjct 1116217 TGAAGCGCGTGGAGTCCGGCGGCGACTGGTCGCTGTTCTGCCCGCGCGAGGCCCCGGGCC 1116158 Query 94367 TGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCA 94426 || ||| | ||| | || || | | || |||||||| || |||| Sbjct 1116157 TGCACGAGTGCTATGGCGAGGAGTTCGAGACCCTCTACCAGCGTTACGAGTCCGAGGGGC 1116098 Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 ||| | ||||| ||| | || | ||||||| ||||| |||| | ||||||| Sbjct 1116097 GTGCCCGCAAGGTCATGAAGGCCCAGCTGCTGTGGCGCAAGATCATGGAGGCCCAGGTGG 1116038 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| || || |||| |||| ||| |||||| | |||| |||||||||||| || Sbjct 1116037 AGACCGGCACCCCCTTCATCATGTACAAGGATGCCTGCAACCAGAAGTCCAACCAGAAGA 1115978 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 ||||||| |||||| ||||||| || ||||||||||| ||| |||| || | Sbjct 1115977 ACCTCGGTACCATCAAGTGCTCGAACCTCTGCACCGAGATCGTCCAGTACACCAGCAACG 1115918 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTC-CACTTTCGTGCGAGATGCC 94665 ||||| | || ||||| ||||||| |||||| |||| | || ||| | |||| Sbjct 1115917 ACGAGGTGGCCGTGTGCAACCTGGCCTCCATTGCCCTGCCGCAGTTTATCCACACCTGCC 1115858 Query 94666 --TACAC---GTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGA 94720 | || | | | || |||| || | ||| |||| | | || | || Sbjct 1115857 CGGAGACCGGGGCCA-TG--TCGTATGACTTTGAGAAGCTGCGCACCGTCACCGGGGTCG 1115801 Query 94721 TGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGA 94780 ||| | ||||||| | | | ||||||| |||| |||||| || |||||| || Sbjct 1115800 TGGCCCGGAACCTGGATCGCATCATCGACATCAACTACTACCCGGTGGAGGAGGCCCGGA 1115741 Query 94781 ACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGG 94840 |||| ||||| || ||||| || |||||||| |||||||| | || || | | Sbjct 1115740 ACTCCAACCTCCGTCACCGGCCGATTGGCATCGGTGTCCAGGGCCTGGCCGATCTGTTCA 1115681 Query 94841 TGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCG 94900 | |||||||| |||| | ||| || ||| | | || | ||| |||| Sbjct 1115680 TCATGATGCGCATGCCGTTCGAGAGCCCGGAGGCGCGTGCCCTCAACAAGGCCATCTTCG 1115621 Query 94901 AAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGC 94960 | | ||| || | || ||| | | ||| ||| |||| || || || ||| | Sbjct 1115620 AGACCATCTACTTCGCGGCGGTCGAGGCGTCCTGCCAGACGGCC-GAGCG--CGTCGGCC 1115564 Query 94961 CACACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTG 95018 | | | |||| | || || || ||| | | ||| | ||||||||||| || Sbjct 1115563 CGTATGCCTCGTACGAGGGGTCCCCGGCTTCGGCC--GGCCAGCTCCAGTTCGACCTGTG 1115506 Query 95019 GGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG--CTCTACGCGCTGATGTTATCAAA 95076 |||||||| ||||| | | || || |||| | || | | || || | || Sbjct 1115505 GGGTGTGACCCCCTCCGACCGGTGGGATTGGGCCGGCCTGAAGGAGCGCAT-TGCTC-GT 1115448 Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 || || || ||| |||| || |||||||| ||||| ||||||||||| |||||||| Sbjct 1115447 CATGGCCTGCGTAACTCGCTCCTGGTGGCCCCGATGCCGACGGCCTCCACCTCGCAGATC 1115388 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || ||| ||| |||| |||| |||| |||||||||| | || | | || ||||| Sbjct 1115387 CTCGGCTTCAATGAGTGCATCGAGCCCTACACCTCCAACATCTATGTCCGTCGTGTGCTG 1115328 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTC-TGGGTGT 95255 ||||||| |||| | ||||| ||||| | |||||| | || | | || || Sbjct 1115327 TCCGGGGAGTTCCAGATGGTCAACCCCCACCTGATCAAGGACCTCA-TTCGCATTGGGGT 1115269 Query 95256 GTGGGGTGACAAGGTCAAGAACCAACTG--CTACG-CGCCAACGGCTCCGTCCAGAACAT 95312 |||| |||||| ||| | || || | || |||| |||||||||||| | Sbjct 1115268 GTGGAATGACAATGTCCGG---CAGATGATCATCGCCGCCGGTGGCTCCGTCCAGCGGGT 1115212 Query 95313 CCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || || || || ||| | ||||| |||||||||||| ||||||||| ||||| Sbjct 1115211 GCCTTCCATCCCCGATGACCTGAAGGCCCTCTACAAGACCACCTGGGAGATCAGCCAGCG 1115152 Query 95373 CGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNN 95432 || ||||| || |||| ||| || |||||||| ||||| Sbjct 1115151 GTCCATCATCGACATGGCCGCCGACCGGGGTGCCTTCATCGATCAGAGCCAGAGCCTGAA 1115092 Query 95433 NNNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAG 95492 || | |||||||| | | | || |||||| ||||| || |||| Sbjct 1115091 CATCTTCATCGGCGAGCCCACCGCCAGCCGGTTGACTTCCATGCACTTCTATGGCTGGAA 1115032 Query 95493 AAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACA 95552 ||||| ||||||||||| |||||||| |||| |||| ||| ||| || |||| | Sbjct 1115031 GAAGGGCCTCAAGACCGGCATGTATTACCTGCGCACCAAGCCCGCGGCCGAGGCCATCAA 1114972 Query 95553 GTTC 95556 |||| Sbjct 1114971 GTTC 1114968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494721876615440