Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq7 214 2e-50 >seq7 Length=2157034 Score = 214 bits (236), Expect = 2e-50 Identities = 418/614 (68%), Gaps = 13/614 (2%) Strand=Plus/Plus Query 52229 CATCGAGTGCGTGCACACGGAGATGTACAATCTGCTCATTGAGCAGCTGA-TAAAAGATG 52287 ||||||| | | |||| ||||||||| ||||| ||||| || || | |||| Sbjct 326362 CATCGAGAACATCCACAGCGAGATGTACTCGCTGCTGATTGA-CACCTATGTGCGGGATG 326420 Query 52288 AGCACGAGCGCGACACGCTGCTGAATGCGTTCGAGCACGTGCCGTGCGTTCGCAAAAAGG 52347 | |||||||||| || | || ||||| | | || ||||| || |||| Sbjct 326421 TGGCCGAGCGCGACCACCTCTTCGGCGCCATCGAGACCATCCCCTGCGTCAAGAAGAAGG 326480 Query 52348 CTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACGCTGGCCGAGCGCATGGTGG 52407 | | ||||| ||| ||||||||| ||| | |||| | ||| |||| |||||| Sbjct 326481 CCGACTGGGCCATGCGCTGGATCGAGGACGAGTCGTCCACCTTCGCCACGCGCCTGGTGG 326540 Query 52408 CCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTA 52467 |||||||| || |||||| | || || |||||| ||| ||||||||||| | | | Sbjct 326541 CCTTCGCCGCCGTGGAGGGCATTTTCTTCTCCGGCTCCTTCGCCGCCATCTTCTGGCTGA 326600 Query 52468 AAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAG 52527 | | | ||| | |||||||| ||||| |||||||| ||| | || || || ||||| | Sbjct 326601 AGAAGCGCGGCCTCATGCCCGGGCTGACCTTCAGCAATGAGCTCATCTCCCGTGACGAGG 326660 Query 52528 GACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGA----CCGAAAAATTG 52583 | || ||| ||||| |||||||| || | ||| | ||| ||| | | Sbjct 326661 GGCTCCACTGCGACTTCGCGTGCCTGCTCTTCT---CGCACCTGAACTCCCGGCCCAGCG 326717 Query 52584 GATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTT 52643 || ||| ||| | | ||| |||||||||| ||||| |||||||| | Sbjct 326718 T----GGCCACCATCACCGCCCTCATCAGCGAGGCGGTGGTCATCGAGAAGGAGTTCCTC 326773 Query 52644 ACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATC 52703 || | || ||||| || ||| | |||||||||| | ||||||| |||||||| Sbjct 326774 ACCGAGGCCCTGCCCGTTCGCCTGATCGGCATGAACGGCGACCTCATGTGCCAGTACATC 326833 Query 52704 GAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGC 52763 ||||||||||| || || ||| ||||| ||||||| || ||| || |||||| Sbjct 326834 GAGTTTGTGGCCGACCGCCTGCTGGTGGAGCTCGGCTGCCCGAAGGTCTACAACGCGGAG 326893 Query 52764 AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAG 52823 || || || || || ||| ||| || || |||||||||||||||| ||||||||| Sbjct 326894 AACCCCTTCGACTTCATGGACATGATCAGTCTCCAGGGCAAGACCAACTTCTTCGAGAAG 326953 Query 52824 CGAGTCGGCGAGTA 52837 || ||||| || || Sbjct 326954 CGCGTCGGTGACTA 326967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261072498080