Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq5 82.4 7e-11 >seq5 Length=2316015 Score = 82.4 bits (90), Expect = 7e-11 Identities = 192/289 (66%), Gaps = 3/289 (1%) Strand=Plus/Minus Query 123050 GCCTCAGTTGTCTTCGTGTTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTA 123109 ||| ||| |||| || || || |||||||| || || ||| || || || || Sbjct 1116597 GCCGCAGCTGTCGTCTTGCTTCCTGCTCACCATGAAGGACGACTCGATTGATGGCATTTA 1116538 Query 123110 TGAAACTTTGCGCGATTGCGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGT 123169 || || ||||| | ||||| | |||||||| | ||||||||| ||| | || || Sbjct 1116537 CGACACCCTGCGCCAGTGCGCCCTCATTTCCAAGACCGCCGGCGGCATCGGCCTCAATGT 1116478 Query 123170 GCACGACGTAAGAGGCCGCGGAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCT 123229 ||| || | | | | ||| | ||| ||||| | || | || |||||| Sbjct 1116477 TCACAACATCCGCGCCACCGGGTCCTACATTGCCGGCACCAATGGCTACTCCAACGGGCT 1116418 Query 123230 CGAATCCATGCTGCGAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGG---CAA 123286 | | |||||||| || | |||| | ||| ||| ||||||||||||| || ||| Sbjct 1116417 GGTCCCGATGCTGCGTGTGTTCAATGCCACCGCGCGTTACGTCGACCAGGGTGGCAACAA 1116358 Query 123287 ACGCAAAGGCGCGATGGCGATCTATCTAGAACCGTGGCACGTTGATGTG 123335 ||| |||||| | || ||||| || || || ||||||| |||||| Sbjct 1116357 GCGCCCCGGCGCGTTTGCCATCTACCTGGAGCCCTGGCACGCGGATGTG 1116309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452001990891440