Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7 183 4e-41 seq5 172 7e-38 seq11 87.8 2e-12 >seq7 Length=2157034 Score = 183 bits (202), Expect = 4e-41 Identities = 532/811 (66%), Gaps = 11/811 (1%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| || | ||| ||||| | ||||| Sbjct 326968 GTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGACTGATCATGTCCAT 326909 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350 || || || ||||||| | ||| | | | || || | || || || || Sbjct 326908 GAAGTCGAAGGGGTTCTCCGCGTTGTAGACCTTCGGGCAGCCGAGCTCCACCAGCAGGCG 326849 Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410 || | || |||| ||||||| |||| || |||||| ||||| ||| | Sbjct 326848 GTCGGCCACAAACTCGATGTACTGGCACATGAGGTCGCCGTTCATGCCGATCAGGCGAAC 326789 Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470 || || || || || |||| ||||||| ||| |||| || || | | || |||| Sbjct 326788 GGGCAGGGCCTCGGTGAGGAACTCCTTCTCGATGACCACCGCCTCGCTGATGAGGGCGGT 326729 Query 127471 AATAGTGTCCACCCCAGGTCTATTGCGTAAAGT-CTTGAAGAGTTC-CACAGCAAACTCT 127528 || ||| |||| | || | | | | || | |||||| ||| || || || Sbjct 326728 GATGGTGGCCACGCTGGGCCGGGAGT-TCAGGTGCGAGAAGAGCAGGCAC-GCGAAGTCG 326671 Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588 |||||| |||||||||||||||||||| ||||| |||| ||| || |||||||| Sbjct 326670 CAGTGGAGCCCCTCGTCACGGGAGATGAGCTCATTGCTGAAGGTCAGCCCGGGCATGAGG 326611 Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648 || |||||||||| |||||| || || || ||||| |||||||| || |||||||| Sbjct 326610 CCGCGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAAATGCCCTCCACG 326551 Query 127649 CACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATC 127708 ||||| || | || ||| ||| |||| | |||| || | ||| ||| Sbjct 326550 GCGGCGAAGGCCACCAGGCGCGTGGCGAAGGTGGACGACTCGTCCTCGATCCAGCGCATG 326491 Query 127709 GCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTC 127768 ||||| | ||||| |||| || || |||| ||||| ||| || | ||||| | | Sbjct 326490 GCCCAGTCGGCCTTCTTCTTGACGCAGGGGATGGTCTCGATGGCGCCGAAGAGGTGGTCG 326431 Query 127769 TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACC 127828 || | ||| | || | || || || || || | |||| ||||| Sbjct 326430 CGCTCGGCCACATCCCGCACATAGGTGTCAATCAGCAGCGAGTACATCTCGCTGTGGA-- 326373 Query 127829 ATTTCATTATGGC--ACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCAT 127886 ||| ||||| ||| | ||||||| | || || ||| ||||| ||||| Sbjct 326372 TGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCACCGGGCCTCGGCGATCTGCACCTCCG 326313 Query 127887 CGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCA 127946 || || ||| | ||||||| ||||| ||||| ||| | || || ||||||| Sbjct 326312 AGGAGAACCGGTTGACCAGATTCTCATTGACAATGCCATCCGACGCGGCGAAGAACGCCA 326253 Query 127947 GGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGTCGAGAT 128003 | | || ||||| | | | || || || |||| | | ||||||||||| || | Sbjct 326252 GCACATGGGAGATGAAGTACCGCTCGTTGGCGGTCAGCTTGTTGTTCCAGTCGTCCAGGT 326193 Query 128004 CCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 | ||||| || |||||||| || ||||| Sbjct 326192 CGCGGGAGAGGTCCACCTCCTCGGCGGTCCA 326162 >seq5 Length=2316015 Score = 172 bits (190), Expect = 7e-38 Identities = 1122/1783 (63%), Gaps = 45/1783 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCTCG-CCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGC 115584 |||||| |||| |||| || || ||| | || ||||| ||||| || |||||||| Sbjct 1114967 TGAACTTGATGGC-CTCGGCCGCGGGCTTGGTGCGCAGGTAATACATGCCGGTCTTGAGG 1115025 Query 115585 CCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCC-AT 115643 |||| ||||||| |||| | ||||| || | |||| | | | | ||| || || || Sbjct 1115026 CCCTTCTTCCAGCCATAGAAGTGCATGGAAGTCAACCGGCTG-GCGGTGGGCTCGCCGAT 1115084 Query 115644 GAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAAT 115703 ||||| ||||| || ||| |||||||||||| ||||| || || ||||| || || Sbjct 1115085 GAAGATGTTCAGGCTCTGGCTCTGATCGATGAAGGCACCCCGGTCGGCGGCCATGTCGAT 1115144 Query 115704 CACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 115763 | | | |||| ||||| || |||||||| ||| | ||||| ||||| Sbjct 1115145 GATGGACCGCTGGCTGATCTCCCAGGTGGTCTTGTAGAGGGCCTTCAGGTCATCGGGGAT 1115204 Query 115764 ---ATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTT 115820 | ||| | ||| |||||||| || || || | | | | || | Sbjct 1115205 GGAAGGCACCCGCT---GGACGGAGCCACCGGCGGCGATGATCATCTGCCGGACATTGTC 1115261 Query 115821 TGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTC 115880 ||| | ||||| |||| |||| | ||||| ||||| | ||||| Sbjct 1115262 ATTCCACACCCCAATGCGAATGAGGTCCTTGATCAGGTGGGGGTTGACCATCTGGAACTC 1115321 Query 115881 ACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTT 115940 || | || || | | ||||||||||| ||||| ||||| | |||||||||| Sbjct 1115322 CCCGGACAGCACACGACGGACATAGATGTTGGAGGTGTAGGGCTCGATGCACTCATTGAA 1115381 Query 115941 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAG 116000 || | ||| || | |||||||| || ||||| || |||| || || ||| || || Sbjct 1115382 GCCGAGGATCTGCGAGGTGGAGGCCGTCGGCATCGGGGCCACCAGGAGCGAGTTACGCAG 1115441 Query 116001 ACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA---GTTGAGCTTTGTCTC 116057 || | |||||| ||||| ||| || |||| || | || | ||| | Sbjct 1115442 GCCATGACGAGCAATGCGCTCCTTCAGGCCGGCCCAATCCCACCGGTCGGAGGGGGTCAC 1115501 Query 116058 CCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 116117 ||| |||| || |||||||| || || || || || ||||| | | | Sbjct 1115502 ACCC---CACAGGTCGAACTGGAGCTGGCCGGCCGAAGCCGGGGACCCCTCGTACGAGGC 1115558 Query 116118 ATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 116177 ||| ||||| | ||| ||| | | || |||||||| || ||| || || || Sbjct 1115559 ATACGGGCCGACGCGCTCGGCCGTCTGGCAGGACGCCTCGACCGCCGCGAAGTAGATGGT 1115618 Query 116178 CTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAA 116237 ||| || ||| || | || ||||| | || |||| | || || Sbjct 1115619 CTCGAAGATGGCCTTGTTGAGGGCACGCGCCTCCGGGCTCTCGAACGGCATGCGCATCAT 1115678 Query 116238 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 116297 || || | ||| || || || |||||||||| |||||| || || || | | || || Sbjct 1115679 GATGAACAGATCGGCCAGGCCCTGGACACCGATGCCAATCGGCCGGTGACGGAGGTTGGA 1115738 Query 116298 CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 116357 || || || |||||| || || | || | ||||| | | || || || || Sbjct 1115739 GTTCCGGGCCTCCTCCACCGGGTAGTAGTTGATGTCGATGATGCGATCCAGGTTCCGGGC 1115798 Query 116358 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA--AC-TG---CGAGTCTCTT- 116410 || ||| |||| | ||||| || | ||| | || || | ||||| Sbjct 1115799 CACGACCCCGGTGACGGTGCGCAGCTTCTCAAAGTCATACGACATGGCCCCGGTCTCCGG 1115858 Query 116411 -CA----TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC 116465 || | || | ||| || ||||| || || ||||| || ||||| | ||| || Sbjct 1115859 GCAGGTGTGGATAAACTGCGGCAGGGCAATGGAGGCCAGGTTGCACACGGCCACCTCGTC 1115918 Query 116466 CTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTT 116525 || ||||||| | || || || || | || || | ||| ||||| || | ||| Sbjct 1115919 GTTGCTGGTGTACTGGACGATCTCGGTGCAGAGGTTCGAGCACTTGATGGTACCGAGGTT 1115978 Query 116526 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585 ||| || || ||||| ||| || ||||||||||| | || | || || || ||||| Sbjct 1115979 CTTCTGGTTGGACTTCTGGTTGCAGGCATCCTTGTACATGATGAAGGGGGTGCCGGTCTC 1116038 Query 116586 CGTTTGGGACTTGAGAATAGCCTTCCATACATCGGCGGCTGGCACAG--TGGCGTTG--- 116640 | |||| || | || ||| | || | || ||||| | || | ||| Sbjct 1116039 CACCTGGGCCTCCATGAT---CTTGCGC-CA-CAGCAGCTGGGCCTTCATGACCTTGCGG 1116093 Query 116641 GCTCGCCCCTCCTCCTCGTA-CTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CT 116698 || |||||||| |||||| | || |||||||| ||| ||||| || || | ||| || Sbjct 1116094 GCACGCCCCTCGGACTCGTAACGCTG-GTAGAGGGTCTCGAACTCCTCGCC-ATAGCACT 1116151 Query 116699 CTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCC 116758 | || || || |||| || ||||| || ||||| | || || ||| || | Sbjct 1116152 CGTGCAGGCCCGGGGCCTCGCGCGGGCAGAACAGCGACCAGTCGCCGCCGGACTCCACGC 1116211 Query 116759 GCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTT 116818 |||||||||| || || || | ||| || || ||||||| || || |||| || | Sbjct 1116212 GCTTCATGAAAAGATCCGGCACCCACAGGGCAAAGAAGAGGTCACGGGCACGAGTCTCCT 1116271 Query 116819 CATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCA 116878 | | || || |||| ||| | ||| | | |||||||||||| || |||| Sbjct 1116272 CGGCGCCGGTGTTCTTGCGCAGCTCGATGAAGGACTCCACATCCGCGTGCCAGGGCTCCA 1116331 Query 116879 GGTACACCGCGATTGACCCCTTGCGACGA---CCAGCCTGGTTTACATACCTCGCCGTTG 116935 |||| | || | | || ||| ||| |||||| || || | ||| || | Sbjct 1116332 GGTAGATGGCAAACGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGCGCGGTGG 1116391 Query 116936 CGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATAC 116995 | || || || || ||||| || | | || | || | |||||| || || ||| Sbjct 1116392 CATTGAACACACGCAGCATCGGGACCAGCCCGTTGGAGTAGCCATTGGTGCCGGCAATGT 1116451 Query 116996 GAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 117055 ||| | |||| | || | ||| | | | || || || || || ||| || | Sbjct 1116452 AGGACCCGGTGGCGCGGATGTTGTGAACATTGAGGCCGATGCCGCCGGCGGTCTTGGAAA 1116511 Query 117056 TTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 117115 | | ||||||| || || |||| || ||||| |||||||| |||| | | || Sbjct 1116512 TGAGGGCGCACTGGCGCAGGGTGTCGTAAATGCCATCAATCGAGTCGTCCTTCATGGTGA 1116571 Query 117116 TGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 117175 |||||||| ||||| || |||| || | ||| |||||||||||| || | | Sbjct 1116572 GCAGGAAGCAAGACGACAGCTGCGGCCGGGGAGACCCACAGTTGAAGAGGGTCGGCGAGG 1116631 Query 117176 CGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTT 117235 | || |||| | |||||||| | ||||||||||||| | | | ||| ||||| Sbjct 1116632 CATGCGTGAAGTAGCGCTGGGACATGTACTCGTAGGTCTCCAGGGCGGCGGGGATGTCGC 1116691 Query 117236 CCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 || || || |||| | || ||||| | |||||| || || Sbjct 1116692 TGCCATGGATGCCGACGGCCACGCGCATGATCATGTACTGCGG 1116734 >seq11 Length=637296 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 176818 CTTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAAC 176877 ||| || || || ||||| |||||||||| || || || || || || || | || Sbjct 467732 CTTGCCTCGCAGGGGGAAGACACCGTAGTAGTCGCGGCCGACGACGACCAGGCCGGACAC 467791 Query 176878 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTT-TCCAGATTGTG 176936 || |||| ||| || || ||||||||||||| |||||| || ||||| | |||| | Sbjct 467792 GGCCAGGGCCTTGGCCGAGTCACCCTCCGTCAGGATGAGGGTGCACTTGTGGGAATTGCG 467851 Query 176937 CCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACC 176976 ||| || |||| ||| || ||||||| |||||| || || Sbjct 467852 -CGTGCCGGCCTGGTTGGCGTCGTCCAGCTTGGGGATGCC 467890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505558868240