Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 111 4e-19 seq3 89.7 1e-12 >seq1 Length=4772237 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || || ||||| |||| ||||||||| | | || | || || Sbjct 1125460 AGGACAAGGTGGAGGGTGGAGTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCC 1125401 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||| || || |||||||| || || || || || ||| Sbjct 1125400 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCC 1125341 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| |||| |||| || ||| | | || || || | ||||| ||| Sbjct 1125340 TGAATCTTAGCCTTGACGGCATCGATGGAGTCAGAGGGCTCGACCTCGAGGGTGATGGTC 1125281 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 1125280 TTGCCGGTGAGGGTCTTGACGAAGATCTG 1125252 >seq3 Length=3619281 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 199420 GACAAGGTGGAGAGTCGACTC---CTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||| | | || |||| | ||| |||| ||||||||| | | || | ||||| Sbjct 1037316 GACAAGGAGAA-AGCCGACGCACGCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATC 1037374 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 || |||||||| |||||||| || || |||||||| || || || || || || Sbjct 1037375 CTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTC 1037434 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||||||| ||| |||| |||| | ||| | | || || || | ||||| || Sbjct 1037435 CTGAATCTTAGCCTTGACGGCGTCGATCGAGTCAGAGGGCTCAACCTCAAGGGTGATGGT 1037494 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || || || || || ||||| || Sbjct 1037495 CTTACCGGTAAGGGTCTTAACGAAAATCTG 1037524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178918367544338