Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 seq1 109 6e-19 >seq3 Length=3619281 Score = 114 bits (126), Expect = 1e-20 Identities = 141/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Plus Query 46405 CTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATAT 46464 ||| ||||| ||||||||||| || ||||| | || |||||||||||||||||||| || Sbjct 1037339 CTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAAT 1037398 Query 46465 CAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GCGTC 46522 || ||||||||| || | || | | |||||||||| ||||| ||||| ||||| Sbjct 1037399 CAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTAGCCTTGACGGCGTC 1037458 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||| | || || || | |||||||| || || || || || ||||| Sbjct 1037459 G--ATCGAGTCAGAGGGCTCAACCTCAAGGGTGATGGTCTTACCGGTAAGGGTCTTAACG 1037516 Query 46583 AAGATTTGCAT 46593 || || ||||| Sbjct 1037517 AAAATCTGCAT 1037527 >seq1 Length=4772237 Score = 109 bits (120), Expect = 6e-19 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| || || || || |||| |||||||||||||||||||| Sbjct 1125439 TCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAA 1125380 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GCG 46520 |||| ||||||||| || | || | | |||||||||| ||||| ||||| || Sbjct 1125379 ATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTAGCCTTGACGGCA 1125320 Query 46521 TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 ||| | | ||| | || || || | |||||||| ||||| || || || || | Sbjct 1125319 TCG--ATGGAGTCAGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGA 1125262 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 1125261 CGAAGATCTGCAT 1125249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236887987280