Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 1e-15 seq5 82.4 9e-11 >seq7 Length=2157034 Score = 98.7 bits (108), Expect = 1e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| || |||||||| || |||||| ||| || | ||||| |||||||| || Sbjct 326552 GTGGAGGGCATTTTCTTCTCCGGCTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGCGGC 326611 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| || || |||| ||| ||||| ||||| ||||||||||| |||||| Sbjct 326612 CTCATGCCCGGGCTGACCTTCAGCAATGAGCTCATCTCCCGTGACGAGGGGCTCCAC 326668 >seq5 Length=2316015 Score = 82.4 bits (90), Expect = 9e-11 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 113185 TCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTAT 113244 |||| ||||||||||| || || ||| |||||| ||||| || || || |||| | | Sbjct 1115146 TCATCGACATGGCCGCCGACCGGGGTGCCTTCATCGATCAGAGCCAGAGCCTGAACATCT 1115087 Query 113245 TCAT-GGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAG 113303 |||| || || ||| || || | | |||| |||||| | || | ||||||||| Sbjct 1115086 TCATCGGCGAGCCCACCGCCAGCCG-GTTGACTTCCATGCACTTCTATGGCTGGAAGAAG 1115028 Query 113304 GGTCTCAAAACGGGGATGTATTACCTCCG 113332 || ||||| || || ||||||||||| || Sbjct 1115027 GGCCTCAAGACCGGCATGTATTACCTGCG 1114999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740739514080