Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3 109 7e-19 >seq3 Length=3619281 Score = 109 bits (120), Expect = 7e-19 Identities = 198/288 (69%), Gaps = 4/288 (1%) Strand=Plus/Plus Query 47986 TCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTT 48045 ||||| || || || || ||| | ||||||||||| ||||| | || || |||||||| Sbjct 2746495 TCATGGTTGAAGAGGATGCCATTGCAGGCATACATGCCGTAGGCCTCGCGGTAGTTCTTC 2746554 Query 48046 ACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTG 48105 || |||||| |||| || || || || || || || || || || || |||||||| || Sbjct 2746555 ACAATCCAGAACCCGTACAGCTTGGCCACGCCGTACGGCGACCGCGGGTAGAAAGGGGTC 2746614 Query 48106 GTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAG 48165 |||| | ||| || |||| | |||| || || || || |||||| || || ||| Sbjct 2746615 TTCTCGGACTGGGGGATCTCCCGAACCTGGCCGTAGAGCTCCGAGGTGGAGGCCTGGTAG 2746674 Query 48166 ATACGAACCCTATC--TTCCATCTCAAGCAAACGGACTGCCTCAAGCACTCTCAGGGTGC 48223 | || ||| | || | | || | |||| || || || | | ||| || | Sbjct 2746675 AAGCGGACCTTGTCGGTGAGGTTGCAGG--TCCGGATGGCGTCCAGAAGGCGCAGAGTAC 2746732 Query 48224 CTATGGCATCTGTCTGACCAGTATACTCGGGCATCTCAAACGAAACCT 48271 | | |||||| ||| || || ||||||| ||| ||||| || |||| Sbjct 2746733 CGACGGCATCCACCTGGCCGGTGTACTCGGCCATGTCAAAGGACACCT 2746780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665492619802480