Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq5 475 5e-129 seq1 172 7e-38 seq12 84.2 3e-11 >seq5 Length=2316015 Score = 475 bits (526), Expect = 5e-129 Identities = 1055/1571 (67%), Gaps = 19/1571 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||| | ||||||||| | || || || ||||| || |||||||| ||||| || |||||| Sbjct 1716378 GCTGTCGGTATCGATCTTGGCACCACCTACTCCTGCGTTGGTGTCTGGCAGAACGATCGT 1716437 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| || | || ||||| || ||||| || || | |||||||| ||||| || Sbjct 1716438 GTTGAGATCATTGCCAACGACCAGGGTAACCGCACCACCGCCTCGTACGTCGCCTTCACC 1716497 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || |||||| | || |||||||| || ||| || |||||||| || Sbjct 1716498 GACTCCGAGCGTCTCATCGGTGATGCCGCCCGCAACCAGGTCGCCATGAACCCGGAGAAC 1716557 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||| ||||| ||||| || || ||||||||||| || || ||| | ||||| | Sbjct 1716558 ACCGTCTTCGACGCCAAGCGCCTCATCGGTCGCAAGTTCTCCGACAAGGAGGTCCAGTCC 1716617 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | ||| | || | || ||||| || || | Sbjct 1716618 GACATGAAGCACTGGCCCT-TCAAGGTCATC--GACAAGGACACCAAGCCCATCATCCAG 1716674 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC--GAAGAAATTTCGTCTATGGTGT 195656 || || || | ||||||| | || | | | ||| || || || || || ||| | Sbjct 1716675 GTCGAGTTCCGCGGTGAG--GTCACCACCTTCACCCCGGAGGAGATCTCCTCCATGATTC 1716732 Query 195657 TGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTG 195716 || | |||||||||||||| || || || | | | ||| | || | || || || | Sbjct 1716733 TGGTCAAGATGAAGGAGACCGCCGAGTCCTACCTCGGTCGCGCCGTCACCGACGCCGTCG 1716792 Query 195717 TGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTA 195776 | || || || || ||||||| || | || || ||||| || ||||| || | ||| | Sbjct 1716793 TCACCGTCCCCGCCTACTTCAACGACGCCCAGCGCCAGGCCACCAAGGATGCCGGTGCCA 1716852 Query 195777 TTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | || || || ||| || | || ||||| || || || || || || ||||| || | Sbjct 1716853 TCGCTGGCCTGAACGTCCTGCGTATCATCAACGAGCCCACCGCCGCCGCCATTGCCTACG 1716912 Query 195837 GTCTGGACAAGAA---CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTG 195893 |||| |||||||| | ||| || |||| || || ||||||| ||||||||||||| Sbjct 1716913 GTCTCGACAAGAAGGGCGAGGGCG-AGAT--GAACGTCCTGATCTTCGATCTCGGTGGTG 1716969 Query 195894 GTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTG 195953 |||| || ||||| || || || | || || | ||||| ||||| || ||||| || | Sbjct 1716970 GTACCTTCGATGTGTCCCTCCTGACCATCGACGACGGTATCTTCGAGGTCAAGGCCACCG 1717029 Query 195954 CTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG 196013 ||||||| ||||| || |||||||| || ||||| || || | || || | Sbjct 1717030 CTGGTGACACTCACCTCGGTGGTGAGGACTTCGACAACCGCCTGGTTGCCCACTTCCTGG 1717089 Query 196014 ATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGC 196073 |||||||||| || ||| | ||||| || | || || || | | || || || || | Sbjct 1717090 ATGAGTTCCGCCGCAAGCACAAGAAGGACCTGTCCGGCAACGCCCGTGCCCTGCGCCGTC 1717149 Query 196074 TTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTG 196133 | | || || || || |||||||| || | |||||| | | || || | | | Sbjct 1717150 TGCGCACCGCCTGCGAGCGTGCCAAGCGCGCCCTCTCTGCCTCTGCCCAGGCCTCCATCG 1717209 Query 196134 AGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTG 196193 ||||||| || | || || || | |||||||| || | || |||||||| || || | Sbjct 1717210 AGATTGACTCTCTCTTCGAGGGTGTCGACTTCTACACCAACATCACCCGTGCCCGCTTCG 1717269 Query 196194 AAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTG 196253 | ||| | ||| || | || | || || ||||| | || || | Sbjct 1717270 AGGAGCTCTGCTCGGACCTCTTCCGTGGCACCCTGTCCCCGGTTGAGCGCGTCCTGTCCG 1717329 Query 196254 ACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTA 196313 || | |||||||| ||||| ||||| ||||| || ||||| || || || || || |||| Sbjct 1717330 ACTCCAAGATGGACAAGTCCAAGGTCGATGAGATCGTCCTGGTCGGTGGTTCCACTCGTA 1717389 Query 196314 TTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGA 196373 |||| | || || | | || ||||||| || || ||| | | Sbjct 1717390 TTCCCCGTGTCCAGAAGCTCGTGTCCGACTTCTTCGGCGGCAAGGAGCCCTGCAAGTCCA 1717449 Query 196374 TCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG 196433 ||||||| ||||| || || || |||||||| ||||| ||||| || ||||| | |||| Sbjct 1717450 TCAACCCCGATGAGGCCGTCGCCTATGGTGCCGCCGTCCAGGCCGCCATTCTGACCGGTG 1717509 Query 196434 TTGACAATAATAACGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGT 196492 | | | || | |||| || || || || || ||||||| ||| | || |||||| Sbjct 1717510 TCACCTCCGAGAA-GACCAAGGACCTGCTCCTGCTCGATGTTGTCCCCCTGTCTCTGGGT 1717568 Query 196493 CTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACT 196552 || || || || ||||| | ||||| | | || | | ||||| || || || || Sbjct 1717569 CTGGAGACCGCCGGTGGCCTGATGACCACCCTGATCAAGCGCAACACCACCATCCCCACC 1717628 Query 196553 AAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTA 196612 |||||| | ||||| || || || ||||| || || | ||||| | || || || Sbjct 1717629 AAGAAGACCGAGGTCTTCTCCACCTACTCCGACAACCAGACCGGTGTCCTGATCCAGGTG 1717688 Query 196613 TATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACG 196672 || || || || ||||| | | | ||| | || || || | ||||| | || Sbjct 1717689 TACGAGGGTGAGCGCTCTCACACCGTCCACAACAACCTCCTCGGCAAGTTCGAGCT--CG 1717746 Query 196673 G--GGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACG 196730 | || || | || ||| | |||||||| |||||| | |||| |||||| || ||| Sbjct 1717747 GCAACATCCCCCCCGCCCCCCGTGGTGTTCCCCAGATTGAGGTTTCCTTCGACATCGACT 1717806 Query 196731 CAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTG 196790 | || || || || |||||| | || | |||||| | | ||| | || | ||||| Sbjct 1717807 CCAACGGTATCCTGAACGTCTCCGCCGTCGACAAGTCCACCGGCCACTCCAACAAGATCA 1717866 Query 196791 TGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATG 196850 || ||||| |||||||| || || || |||||||| || || || ||| || || | Sbjct 1717867 CCATCACCAACGACAAGGGCCGCCTGTCCAAGGAGGAGATCGAGCGCATGATTGCCGACG 1717926 Query 196851 CGGAAAAGTAC 196861 | || |||||| Sbjct 1717927 CCGAGAAGTAC 1717937 Score = 95.1 bits (104), Expect = 2e-14 Identities = 281/433 (65%), Gaps = 9/433 (2%) Strand=Plus/Minus Query 78081 CTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGACTCTATTAATG 78140 ||||||| || ||| |||| ||||| ||||| || | | ||||| ||||| ||| ||| Sbjct 1116604 CTCCCCGGCCGCAGCTGTCGTCTTGCTTCCTGCTCACCATGAAGGACGACTCGATTGATG 1116545 Query 78141 GTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGGTGGTATAGGTC 78200 | || |||| || || |||| || | ||||| ||| || || || || || | Sbjct 1116544 GCATTTACGACACCCTGCGCCAGTGCGCCCTCATTTCCAAGACCGCCGGCGGCATCGGCC 1116485 Query 78201 TTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAATGGTCAGTCTG 78260 | || ||||| | | || || | | |||| ||| || || ||||| | || Sbjct 1116484 TCAATGTTCACAACATCCGCGCCACCGGGTCCTACATTGCCGGCACCAATGGCTACTCCA 1116425 Query 78261 ATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGTCAACCAAGCGG 78320 | || | | || ||||| | || |||||||| || || || || ||| |||| || Sbjct 1116424 ACGGGCTGGTCCCGATGCTGCGTGTGTTCAATGCCACCGCGCGTTACGTCGACCA---GG 1116368 Query 78321 GTCGTAGGAAG------GGGTCATTCGCTATGTACCTTGAACCTTGGCACGCCGATGTAA 78374 || | | ||| || | || || || ||||| || || |||||||| ||||| Sbjct 1116367 GTGGCAACAAGCGCCCCGGCGCGTTTGCCATCTACCTGGAGCCCTGGCACGCGGATGTGG 1116308 Query 78375 TGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAGGGATTTAT 78434 | || | || || || ||| || | |||||| |||| | | || | | Sbjct 1116307 AGTCCTTCATCGAGCTGCGCAAGAACACCGGCGCCGAGGAGACTCGTGCCCGTGACCTCT 1116248 Query 78435 TCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGGTAAATGGT 78494 || ||| ||||| | ||||||||||| |||||| | || ||| || || | |||| Sbjct 1116247 TCTTTGCCCTGTGGGTGCCGGATCTTTTCATGAAGCGCGTGGAGTCCGGCGGCGACTGGT 1116188 Query 78495 CTCTTTTCTGTCC 78507 | || ||||| || Sbjct 1116187 CGCTGTTCTGCCC 1116175 >seq1 Length=4772237 Score = 172 bits (190), Expect = 7e-38 Identities = 178/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171859 AGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCG 171918 || ||||| ||||| || || ||||| || || || || |||||||||||||| ||| | Sbjct 1125246 AGGATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCC 1125305 Query 171919 TCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGAT 171978 || ||| | |||||| | |||| || |||||||| || ||||| || || || || ||| Sbjct 1125306 TCTGACTCCATCGATGCCGTCAAGGCTAAGATTCAGGACAAGGAGGGTATCCCCCCTGAT 1125365 Query 171979 CAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTAC 172038 ||||| || || ||||| || || || ||||| || || || ||||||||| | || ||| Sbjct 1125366 CAGCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCGGACTAC 1125425 Query 172039 AACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 ||| | || ||||| || || || |||||||| || | || || |||||||| Sbjct 1125426 AACATCCAGAAGGACTCCACCCTCCACCTTGTCCTCCGCCTGCGTGGTGGTGC 1125478 Score = 98.7 bits (108), Expect = 1e-15 Identities = 220/327 (67%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||| || || | | | | ||| | || || | || || || ||| Sbjct 946974 AAGATGAAGGAGATCGCCGAGACCTACCTTGGTCATGAGGTCAAGAACGCCGTCGTCACT 946915 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || | || || ||||| || ||||| || | | || || Sbjct 946914 GTGCCGGCCTACTTCAACGACGCCCAGCGCCAGGCCACCAAGGATGCCGGCACCATCGCC 946855 Query 195782 GGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 ||||| || |||| | | || ||||| || || || || ||||| ||||| || || || Sbjct 946854 GGTCTCAA-TGTCCTGCGCATCATCAACGAGCCCACCGCCGCTGCCATTGCCTACGGCCT 946796 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 ||||||| |||| ||| || | | | | || ||||||||||||||||| || Sbjct 946795 GGACAAG---AAGGGCGACGAGCGCACCATCCTCGTGTTCGATCTCGGTGGTGGTACCTT 946739 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 ||||| || || || ||||| || | ||||| || ||| || ||||| Sbjct 946738 CGATGTGTCCCTGCTGTCCATTGACTCCGGCGTCTTCGAGGTGCTGGCCACCAGCGGTGA 946679 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || |||||| | || ||||| Sbjct 946678 CACCCACCTCGGTGGTCAGGACTTCGA 946652 >seq12 Length=745128 Score = 84.2 bits (92), Expect = 3e-11 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 198549 ATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAACCCTTCTAGCTCGT 198608 ||||| || ||||| || || |||| |||||||||| ||||| ||||| || || Sbjct 117774 ATCCCCCGCGGTGCCCTGCTGACCGGGCCCCCGGGTACCGGTAAGACCCTGCTGGCCAAG 117833 Query 198609 GCTATCGCGGGTGAATCGAGTGTCCCCTTTCTTCAGTG-CTCCGCGGCGAGTTTCATCGA 198667 || | ||| ||||| | | || ||||| || ||||| ||||| || |||||||| Sbjct 117834 GCCACCGCCGGTGAGGCTGGCGTTCCCTTCCT-CAGTGTCTCCGGCTCGGAGTTCATCGA 117892 Query 198668 GATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTTTGAGCAAGCACGTGAAAA 198727 ||||| || ||||| || | || || || || ||||| ||| || | ||| Sbjct 117893 GATGTATGTCGGTGTCGGGCCGGCCCGTGTGCGCGATCTCTTCGAGACCGC-CAAGAAGC 117951 Query 198728 TCA-ACCATGTATCATCTTCATTGATGAGATTGACGC 198763 || || || ||||| ||||| |||||||| ||||| Sbjct 117952 ACACCCCCTGCATCATTTTCATCGATGAGATCGACGC 117988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657860640218080