Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 seq3 131 1e-25 >seq1 Length=4772237 Score = 143 bits (158), Expect = 2e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| |||||||| ||||| |||||||| ||| | || | || Sbjct 1125460 AGGACAAGGTGGAGGGTGGAGTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCC 1125401 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| |||||||| ||||| || ||||| || | || | ||||||||||| Sbjct 1125400 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCC 1125341 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||||||| | || || ||| || |||||| || | ||| |||||| Sbjct 1125340 TGAATCTTAGCCTTGACGGCATCGATGGAGTCAGAGGGCTCGACCTCGAGGGTGATGGTC 1125281 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || ||||||||||| Sbjct 1125280 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1125249 >seq3 Length=3619281 Score = 131 bits (144), Expect = 1e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 34789 CTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGAT 34848 |||||| ||||| ||||| || ||| |||| |||| || || ||||| |||||||| || Sbjct 1037339 CTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAAT 1037398 Query 34849 CAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGC 34908 ||| || ||||| || | || | ||||||||||| | || || ||||||| | Sbjct 1037399 CAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTAGCCTTGACGGCGTC 1037458 Query 34909 TATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAA 34968 ||||| ||| || ||| || |||| ||| |||||||| || || |||||||| || || Sbjct 1037459 GATCGAGTCAGAGGGCTCAACCTCAAGGGTGATGGTCTTACCGGTAAGGGTCTTAACGAA 1037518 Query 34969 GATCTGCATG 34978 ||||||||| Sbjct 1037519 AATCTGCATG 1037528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691950552466