Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5 343 1e-89 seq7 255 6e-63 seq1 125 7e-24 seq3 120 3e-22 >seq5 Length=2316015 Score = 343 bits (380), Expect = 1e-89 Identities = 1159/1780 (65%), Gaps = 65/1780 (4%) Strand=Plus/Plus Query 147938 GGCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGCGTA 147997 ||| ||||| | |||||||| || |||||||| |||||||||||| | ||| | || Sbjct 1114983 GGCCGCGGGCTTGGTGCGCAGGTAATACATGCCGGTCTTGAGGCCCTTCTTCCAGCCATA 1115042 Query 147998 GTCGTGCACCGACGACATGAGCGTGTACGTCGGGTGCGGC-ACAAACAGATTAAACGACT 148056 | ||||| || | || | || || || | || | | || | || | || Sbjct 1115043 GAAGTGCATGGAAGTCAACCGGCTGGCGGTGGGCT-CGCCGATGAAGATGTTCAGGCTCT 1115101 Query 148057 GGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTC 148115 ||||||| || ||||| || || ||||| |||||||| || |||| | | | || Sbjct 1115102 GGCTCTGATCGATGAAGGCACCCCGGTCGGCGGCCATGTCGATGATGGACCGCTGGCTG- 1115160 Query 148116 ATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGC 148175 |||||||||| |||||||| || ||| | | |||||| ||| | ||||| Sbjct 1115161 ATCTCCCAGGTGGTCTTGTAGAGGGCCTTCAGGTCATCGGGGATGGAAGGCACCCGCTGG 1115220 Query 148176 ACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCG 148235 || ||||| | | || | ||| | || | | ||| | | | | Sbjct 1115221 ACGGAGCCACCGGCGGCGATGATCATCTGCCGGACATTGTCATTCCACACCCCAATGCGA 1115280 Query 148236 ATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGC 148295 || ||||| | |||||| | | || |||| ||| ||||| |||| ||||| || || Sbjct 1115281 ATGAGGTCCTTGATCAGGTGGGGGTTGACCATCTGGAACTCCCCGGACAGCACACGACGG 1115340 Query 148296 AGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTC 148355 | ||| | |||| || | || || | |||| ||| ||| | ||||||| ||| Sbjct 1115341 ACATAGATGTTGGAGGTGTAGGGCTCGATGCACTCATTGAAGCCGAGGATCTGCGAGGTG 1115400 Query 148356 GTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG 148415 | ||||| ||||| || ||||| |||||||| |||| || || || | Sbjct 1115401 GAGGCCGTCGGCATCGGGGCCACCAGGAGCGAGTTACGCAGGCCATGACGAGCAAT---G 1115457 Query 148416 CGCT---TCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTAC 148472 |||| |||| | ||||| ||||| | || || ||||| ||||| |||| || Sbjct 1115458 CGCTCCTTCAGGCCGGCCCAATCCCACCGGTCGGAGGGGGTCACACCCCACAGGTCGAAC 1115517 Query 148473 TGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCC 148532 || || |||| ||| ||| |||||||||||| ||||| ||| ||| | Sbjct 1115518 TGGAGCTGGCCGGCCGAAGCCGGGGACCCCTCGTACGAGGCATACGGGCCGA-CGCGCTC 1115576 Query 148533 GCCAGT-TCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 | | || | |||| |||||||| ||| || |||| || |||||| || | |||| Sbjct 1115577 GGCCGTCTGGCAGGACGCCTCGACCGCCGCGAAGTAGATGGTCTCGAAGATGGCCTTGTT 1115636 Query 148592 GAG--CA-GCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGC 148648 ||| || ||||| ||| ||| ||| ||||||| |||| | | ||| ||||| Sbjct 1115637 GAGGGCACGCGCCTCCGG---GCTCTCGAACGGCATGCGCATCATGATGAACAGATCGGC 1115693 Query 148649 AAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC 148708 |||||||| || || | |||||| |||||||| | ||||||| || || ||| Sbjct 1115694 CAGGCCCTGGACACCGATGCCAATCGGCCGGTGACGGAGGTTGGAGTTCCGGGCCTCCTC 1115753 Query 148709 GAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAAT 148768 | ||| |||| |||| ||||||||| || || || || |||| ||| || | Sbjct 1115754 CACCGGGTAGTAGTTGATGTCGATGATGCGATCCAGGTTCCGGGCCACGACCCCGGTGAC 1115813 Query 148769 TCTGCGCAGCAATTCAAAATCGTACT---TGTCA----TCTACGA-------TGCAT--- 148811 |||||||| ||||| || ||| || | ||| || || || Sbjct 1115814 GGTGCGCAGCTTCTCAAAGTCATACGACATGGCCCCGGTCTCCGGGCAGGTGTGGATAAA 1115873 Query 148812 ---CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTAC 148868 ||| || ||| || ||||| || |||||||||||| ||| || | | ||||| Sbjct 1115874 CTGCGG--CAGGGCAATGGAGGCCAGGTTGCACACGGCCACCTCGTCGTTGCTGGTGTAC 1115931 Query 148869 TCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTC 148928 | |||||||||| ||| || || ||| ||||| || | |||||| || ||| | Sbjct 1115932 TGGACGATCTCGGTGCAGAGGTTCGAGCACTTGATGGTACCGAGGTTCTTCTGGTTGGAC 1115991 Query 148929 TTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCC 148988 || |||||| || |||||||||| ||| | || ||| || |||||||| | ||| Sbjct 1115992 TTCTGGTTGCAGGCATCCTTGTACATGATGAAGGGGGTGCCGGTCTCCACCTGGGCCTCC 1116051 Query 148989 ACTATGAACCGATGCAGGTCCTGCGCGCGCA----CTTGCTGCTCGTAGCGACCCTCCTG 149044 | || || ||| ||| || || ||||| | | | || ||||| Sbjct 1116052 ATGATCTTGCGCCACAGCAGCTGGGCCTTCATGACCTTGCGG---GCA-CGCCCCTCGGA 1116107 Query 149045 CTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCA 149104 |||||| || || ||||||| ||||||| ||||| |||| || || ||| Sbjct 1116108 CTCGTAACGCTGGTAGAGGGTCTCGAACTCCTCGCCATAGCACTCGTGCAGGCCCGGGGC 1116167 Query 149105 CTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATC 149164 || | ||||||| | |||||||| ||||| | | | |||||||||||| || ||||| Sbjct 1116168 CTCGCGCGGGCAGAACAGCGACCAGTCGCCGCCGGACTCCACGCGCTTCATGAAAAGATC 1116227 Query 149165 GGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCT--TCGGCGCCCATGTTG 149222 |||||||| || || | | |||||| || || ||||| |||||||| |||| Sbjct 1116228 CGGCACCCACAGGGCAAAGAAGAGGTCACGGGC--ACGAGTCTCCTCGGCGCCGGTGTTC 1116285 Query 149223 CGGCGCAGGTTGAGCACGCTGAAT--ATGTCCGCGTGCCACGGCTCAATGTACACCGCGA 149280 |||||| | || | | || | | ||||||||||| ||||| | ||| | || | Sbjct 1116286 TTGCGCAGCTCGATGAAG--GACTCCACATCCGCGTGCCAGGGCTCCAGGTAGATGGCAA 1116343 Query 149281 GCGCGCCCTTGCGC---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTC 149337 |||||| |||| ||||| ||||||||||||| ||| | || || ||||| | Sbjct 1116344 ACGCGCCGGGGCGCTTGTTGCCACCCTGGTCGACGTAACGCGCGGTGGCATTGAACACAC 1116403 Query 149338 GAACCATAGGTTCAATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATG--CGACTGCCGC 149394 | | ||| || | | ||| | | ||| ||| || || | |||| ||| ||| Sbjct 1116404 GCAGCATCGGGACCA-GCCCGTTGGAGTAGCCATTGGTGCCGGCAATGTAGGAC--CCGG 1116460 Query 149395 GCGCTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGC 149454 || || | ||||| || |||| ||||||||||||| || ||| || ||| |||| Sbjct 1116461 TGGCGCGGATGTTGTGAACATTGAGGCCGATGCCGCCGGCGGTCTTGGAAATGAGGGCGC 1116520 Query 149455 AGTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGC 149514 | | || || || ||| ||||| || || |||| ||||||||| ||||| |||| Sbjct 1116521 ACTGGCGCAGGGTGTCGTAAATGCCATCAATCGAGTCGTCCTTCATGGTGAGCAGGAAGC 1116580 Query 149515 ACGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAA 149574 | || ||| ||||| | | || ||| | ||| || ||| || || | Sbjct 1116581 AAGACGACAGCTGCGGCCGGGGAGACCCACAGTTGAAGAGGGTCGGCGAGGCATGCGTGA 1116640 Query 149575 AATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGA 149634 | || |||| ||| |||||| | ||| || || | ||||| |||||||| Sbjct 1116641 AGTAGCGCTGGGACATGTACTCGTAGGTCTCCAGGGCGGCGGGGATGTCGCTGCCATGGA 1116700 Query 149635 TGCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTC 149674 |||| | ||| |||||||| | ||| | |||||| ||||| Sbjct 1116701 TGCCGACGGCCACGCGCATGATCATGTACTGCGGGCGCTC 1116740 >seq7 Length=2157034 Score = 255 bits (282), Expect = 6e-63 Identities = 551/812 (68%), Gaps = 19/812 (2%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || |||||||| ||||| || ||||| || ||||||| | || ||| Sbjct 326971 CTGGTAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGACTGATCATGTC 326912 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| ||||| |||||| || ||||| ||| | || || ||||| Sbjct 326911 CATGAAGTCGAAGGGGTTCTCCGCGTTGTAGACCTTCGGGCAGCCGAGCTCCACCAGCAG 326852 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || |||||||| ||||||| ||||||| | |||||||||| | || Sbjct 326851 GCGGTCGGCCACAAACTCGATGTACTGGCACATGAGGTCGCCGTTCATGCCGATCAGGCG 326792 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 || |||| ||| |||| ||||||||||| ||| |||||||||| ||| | ||| Sbjct 326791 AACGGGCAGGGCCTCGGTGAGGAACTCCTTCTCGATGACCACCGCCTCGCTGATGAGGGC 326732 Query 120591 GAGCATAGTG---TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 | || ||| || |||| | | |||| | | ||| | || ||||||||| Sbjct 326731 GGTGATGGTGGCCACGCTGGGC--CGGGAGTTC-AGGTGCG---AGAAGAGCAGGCACGC 326678 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 ||||| ||| || |||||||| || || || ||||| ||||| || ||||| ||||| Sbjct 326677 GAAGTCGCAGTGGAGCCCCTCGTCACGGGAGATGAGCTCATTGCTGAAGGTCAGCCCGGG 326618 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| ||| | |||| | |||| |||||||| ||| ||| || ||||| | ||| Sbjct 326617 CATGAGGCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAAATGCC 326558 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGATCCA 120827 ||||||| ||| ||||| |||| |||| ||| || || | || || | |||||||| Sbjct 326557 CTCCACGGCGGCGAAGGCCACCAGGCGCGTGGCGAAGGTGGACGACTCGTCCTCGATCCA 326498 Query 120828 CTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCGTTCAGCAG 120887 ||||||||| |||||||| || ||||| || || ||||| ||| | || Sbjct 326497 GCGCATGGCCCAGTCGGCCTTCTTCTTGACGCAGGGGATGGTCTCGATGGCGCCGAAGAG 326438 Query 120888 CATGTCGCGCTCGCCCTCCT-CCGCAATCAGCTGATGGATGAGCAGATTGTACATTTCCG 120946 |||||||||| || | | ||||| || || | || ||||| |||||| || Sbjct 326437 GTGGTCGCGCTCGGCCACATCCCGCACATAGGTG-TCAATCAGCAGCGAGTACATCTCGC 326379 Query 120947 TGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTC-CAGCTCGGGC 121005 |||| | | |||||| | || | ||| ||| || | ||||| | || || Sbjct 326378 TGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGCACCGGGCCTCGGCGATC-TGC 326320 Query 121006 ACCGCCCGCTGCATGTAC---TCGATAAGGTTAATATTCACGATACTGTCGGCGGCGGCG 121062 ||| ||| | | || | || || || ||| || || | || | |||||| Sbjct 326319 ACC-TCCGAGG--AGAACCGGTTGACCAGATTCTCATTGACAATGCCATCCGACGCGGCG 326263 Query 121063 AAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGTGCGCAAAA 121122 |||||||||||||| || ||| |||| ||||||| | | || ||||||| | Sbjct 326262 AAGAACGCCAGCACATGGGAGATGAAGTACCGCTCGTTGGCGGTCAGCTTGTTGTTCCAG 326203 Query 121123 TCGTCATAGTCCTTGGACAGGTCGACCTCCTC 121154 ||||| ||| ||| ||||| |||||||| Sbjct 326202 TCGTCCAGGTCGCGGGAGAGGTCCACCTCCTC 326171 >seq1 Length=4772237 Score = 125 bits (138), Expect = 7e-24 Identities = 151/201 (75%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 |||||| || ||||| || ||||| || | | | | ||| |||||||||||||||| Sbjct 1125446 GGTGGAGTCCTTCTGGATGTTGTAGTC--CGAGAGGGTACGGCCGTCCTCGAGCTGCTTG 1125389 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| |||| || |||||||| || || ||||| || |||||||| ||||| | Sbjct 1125388 CCGGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTAGCC 1125329 Query 133581 TTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639 |||| | || || | | ||| | |||||| || |||| ||||| ||| |||||||| || Sbjct 1125328 TTGA-CGGCATCGATGGAGTCAGAGGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAG 1125270 Query 133640 AGTTTTTACGAAAATCTGCAT 133660 || || ||||| |||||||| Sbjct 1125269 GGTCTTGACGAAGATCTGCAT 1125249 >seq3 Length=3619281 Score = 120 bits (132), Expect = 3e-22 Identities = 123/158 (78%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| ||| |||| || |||||||| || || ||||| || |||||| Sbjct 1037373 TCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTG 1037432 Query 133566 TCGGTGATCTTTTGCTTGAGCTGC-TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 || ||||| ||||| | || || | || ||| | |||||| || || | ||||| Sbjct 1037433 TCCTGAATCTTAGCCTTGA-CGGCGTCGATCGAGTCAGAGGGCTCAACCTCAAGGGTGAT 1037491 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATGG 133662 ||| || ||||| || || || |||||||||||||||| Sbjct 1037492 GGTCTTACCGGTAAGGGTCTTAACGAAAATCTGCATGG 1037529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419506849360