Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq7 154 1e-32 >seq7 Length=2157034 Score = 154 bits (170), Expect = 1e-32 Identities = 350/522 (67%), Gaps = 7/522 (1%) Strand=Plus/Plus Query 46750 TCGAGCACGTGCCATGCGTTCGCAAAAAGGCCCAGTGGGCCATGAAGTGGATCGAGAGCG 46809 ||||| | | || ||||| || |||||| | ||||||||| ||||||||| || Sbjct 326451 TCGAGACCATCCCCTGCGTCAAGAAGAAGGCCGACTGGGCCATGCGCTGGATCGAGGACG 326510 Query 46810 AGACCGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCGTGttttttt 46869 || | |||| | ||| |||| ||||||| ||||| || || ||| | || || | Sbjct 326511 AGTCGTCCACCTTCGCCACGCGCCTGGTGGCCTTCGCCGCCGTGGAGGGCATTTTCTTCT 326570 Query 46870 CGGGCAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGT 46929 | ||| || |||||||| || | | || | ||| | ||||| || ||||| | Sbjct 326571 CCGGCTCCTTCGCCGCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCCGGGCTGACCT 326630 Query 46930 TCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTAT 46988 |||| || ||| | ||||| || ||||| || || ||| ||||| ||||| || || | Sbjct 326631 TCAGCAATGAGCTCATCTCCCGTGACGAGGGGCTCCACTGCGACTTCGCGTGCCTGCTCT 326690 Query 46989 TACAAGACGCGCGTGAATGAGAAATTAAACTCGGACACGATCCTGAGCATGTTTAGGGAG 47048 | ||| | |||| | | || ||| ||| | | | || ||| Sbjct 326691 TCT----CGCACCTGAACTCCCGGCCCAGCGTGGCCACCATCACCGCCCTCATCAGCGAG 326746 Query 47049 GCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGT-CGCCTTGCTGGGCAT 47107 |||||| |||||| |||||||| | || | ||| |||||||| ||||| | | ||||| Sbjct 326747 GCGGTGGTCATCGAGAAGGAGTTCCTCACCGAGGCCCTGCCCGTTCGCCT-GATCGGCAT 326805 Query 47108 GAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCT 47167 ||||| | |||||| | || || ||||||||||| || || ||| ||||| |||| Sbjct 326806 GAACGGCGACCTCATGTGCCAGTACATCGAGTTTGTGGCCGACCGCCTGCTGGTGGAGCT 326865 Query 47168 CGGACAACCGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCT 47227 ||| ||||| | || || || || || || || ||| ||| || || Sbjct 326866 CGGCTGCCCGAAGGTCTACAACGCGGAGAACCCCTTCGACTTCATGGACATGATCAGTCT 326925 Query 47228 CGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTA 47269 | ||||||| ||||| || |||||||| || ||||| || || Sbjct 326926 CCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGTGACTA 326967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609925065040