Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 149 6e-31 seq1 118 1e-21 seq3 116 4e-21 seq7 96.9 4e-15 >seq5 Length=2316015 Score = 149 bits (164), Expect = 6e-31 Identities = 368/557 (66%), Gaps = 11/557 (2%) Strand=Plus/Minus Query 7568 ACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAA 7627 ||||| | |||||||||| || ||||| || ||| ||||| ||||||| |||| | Sbjct 1116727 ACATGATCATGCGCGTGGCCGTCGGCATCCATGGCAGCGACATCCCCGCCGCCCTGGAGA 1116668 Query 7628 CGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGG 7687 | ||| | ||||| | | || ||||| || ||||| ||| | || | | Sbjct 1116667 CCTACGAGTACATGTCCCAGCGCTACTTCACGCATGCCTCGCCGACCCTCTTCAACTGTG 1116608 Query 7688 GCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCG 7747 | | | ||| || |||| || || || |||| |||||| || ||| || | Sbjct 1116607 GGTCTCCCCGGCCGCAGCTGTCGTCTTGCTTCCTGCTCACCATGAAGGACGACTCGATTG 1116548 Query 7748 ACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAG 7807 | ||||||||| |||| |||||| | |||||| |||||||| || |||||| || | Sbjct 1116547 ATGGCATTTACGACACCCTGCGCCAGTGCGCCCTCATTTCCAAGACCGCCGGCGGCATCG 1116488 Query 7808 GTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAG 7867 | || || || || || | ||||||| ||| | ||| | |||||| || | Sbjct 1116487 GCCTCAATGTTCACAACATCCGCGCCACCGGGTCCTACATTGCCGGCACCAATGGCTACT 1116428 Query 7868 CCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGG 7927 ||| ||| | | || ||| |||| ||||||||| | | | ||| | || ||||||| Sbjct 1116427 CCAACGGGCTGGTCCCGATGCTGCGTGTGTTCAATGCCACCGCGCGTTACGTCGACCAGG 1116368 Query 7928 GGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTT 7984 | || || |||| ||||| ||||||||| ||||||| ||||||||||| | Sbjct 1116367 GTGGCAACAAGCGCCCCGGCGCGTTTGCCATCTACCTGGAGCCCTGGCACGCGGA----T 1116312 Query 7985 ACGCAGTGCTAAAT----CTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGAT 8040 | ||| || || ||||| |||| || ||| || | || || || Sbjct 1116311 GTGGAGTCCTTCATCGAGCTGCGCAAGAACACCGGCGCCGAGGAGACTCGTGCCCGTGAC 1116252 Query 8041 CTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAA 8100 || ||||| | |||||||||| ||||| || |||| |||||| | | || || | Sbjct 1116251 CTCTTCTTTGCCCTGTGGGTGCCGGATCTTTTCATGAAGCGCGTGGAGTCCGGCGGCGAC 1116192 Query 8101 TGGTCGCTCATGTGCCC 8117 |||||||| | ||||| Sbjct 1116191 TGGTCGCTGTTCTGCCC 1116175 >seq1 Length=4772237 Score = 118 bits (130), Expect = 1e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| ||||| || ||||||||||| | ||| | ||| ||| Sbjct 1125457 ACAAGGTGGAGGGTGGAGTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCGTCCTCG 1125398 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || ||||||| ||||||||||| || || || || || || || ||| Sbjct 1125397 AGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGA 1125338 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| || || | | ||| || | || || ||||| || ||||| || Sbjct 1125337 ATCTTAGCCTTGACGGCATCGATGGAGTCAGAGGGCTCGACCTCGAGGGTGATGGTCTTG 1125278 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTT 134719 ||||| | || || ||||| || ||||| |||| Sbjct 1125277 CCGGTGAGGGTCTTGACGAAGATCTGCATCCTGTT 1125243 >seq3 Length=3619281 Score = 116 bits (128), Expect = 4e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 134525 CTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAAT 134584 ||| || |||||||||||| | |||| | || |||||||| ||||| || ||||| Sbjct 1037339 CTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAAAT 1037398 Query 134585 CAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTC 134644 || ||||||||||| || || || || || || || ||||| || ||||| ||||| Sbjct 1037399 CAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTAGCCTTGACGGCGTC 1037458 Query 134645 CAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 | | ||| || | || || || || || ||||| |||||||| | || |||||||| Sbjct 1037459 GATCGAGTCAGAGGGCTCAACCTCAAGGGTGATGGTCTTACCGGTAAGGGTCTTAACGAA 1037518 Query 134705 AATTTGCAT 134713 ||| ||||| Sbjct 1037519 AATCTGCAT 1037527 >seq7 Length=2157034 Score = 96.9 bits (106), Expect = 4e-15 Identities = 221/333 (66%), Gaps = 15/333 (5%) Strand=Plus/Minus Query 21544 CGATCCGCCACGAATTCAATGTATTGACACATGCTGTCGCAATTCATGCCCAACAGATCG 21603 || || ||||| || || ||||| || |||||| ||||| |||||||| | ||| Sbjct 326850 CGGTCGGCCACAAACTCGATGTACTGGCACATGAGGTCGCCGTTCATGCCGATCAGGCGA 326791 Query 21604 ACCGGTAGCGCTTCGGTGAAAAACTCCTTCTCGATAGCCACCGCTTCCTTGATCATGGCG 21663 || || || || ||||||| |||||||||||||| ||||||| || |||| | |||| Sbjct 326790 ACGGGCAGGGCCTCGGTGAGGAACTCCTTCTCGATGACCACCGCCTCGCTGATGAGGGCG 326731 Query 21664 TGTATTTCACCGGCGGACAATTTGTCTTGAGGCTCGATGTATTTGTTGTAGTAG---AGA 21720 || || || || || ||| | || || || || || Sbjct 326730 GTGAT------GGTGGCCACGCTG------GGCCGGGAGTTCAGGTGCGAGAAGAGCAGG 326683 Query 21721 CAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTGAGA 21780 || || || | | ||| | |||||||| || || || | || |||||||| || || Sbjct 326682 CACGCGAAGTCGCAGTGGAGCCCCTCGTCACGGGAGATGAGCTCATTGCTGAAGGTCAGC 326623 Query 21781 CCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaaaaC 21840 |||||||| | || || || || | | || || || || ||| ||||| || || Sbjct 326622 CCGGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAA 326563 Query 21841 ACGCCCTCCACAATGGCGAACGCCACCATGCGC 21873 | ||||||||| |||||| ||||||| |||| Sbjct 326562 ATGCCCTCCACGGCGGCGAAGGCCACCAGGCGC 326530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397048059280