Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 203 4e-47 seq7 161 1e-34 seq12 100 4e-16 seq11 93.3 5e-14 >seq5 Length=2316015 Score = 203 bits (224), Expect = 4e-47 Identities = 1129/1785 (63%), Gaps = 49/1785 (3%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCTCG-CCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGC 117863 |||||| |||| |||| || || ||| | || ||||| ||||| || |||||||| Sbjct 1114967 TGAACTTGATGGC-CTCGGCCGCGGGCTTGGTGCGCAGGTAATACATGCCGGTCTTGAGG 1115025 Query 117864 CCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCC-AT 117922 |||| ||||||| |||| | ||||| || | |||| | | ||| || || || || Sbjct 1115026 CCCTTCTTCCAGCCATAGAAGTGCATGGAAGTCAACCGGCTGGCGGTGGG-CTCGCCGAT 1115084 Query 117923 GAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAAT 117982 ||||| ||||| || ||| |||||||||||| ||||| || || ||||| || || Sbjct 1115085 GAAGATGTTCAGGCTCTGGCTCTGATCGATGAAGGCACCCCGGTCGGCGGCCATGTCGAT 1115144 Query 117983 CACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGAT 118042 | | | |||| ||||| ||| |||||||| ||| | ||||| ||||| Sbjct 1115145 GATGGACCGCTGGCTGATCTCCCAGGTGGTCTTGTAGAGGGCCTTCAGGTCATCGGGGAT 1115204 Query 118043 ---ATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTT 118099 | ||| | ||| ||| ||||| || || || | | | | || | Sbjct 1115205 GGAAGGCACCCGCT---GGACGGAGCCACCGGCGGCGATGATCATCTGCCGGACATTGTC 1115261 Query 118100 TGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTC 118159 ||| | ||||| |||| |||| | || || ||||| | ||||| Sbjct 1115262 ATTCCACACCCCAATGCGAATGAGGTCCTTGATCAGGTGGGGGTTGACCATCTGGAACTC 1115321 Query 118160 ACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTT 118219 || | || || | | |||||| |||| ||||| ||||| | |||||||||| Sbjct 1115322 CCCGGACAGCACACGACGGACATAGATGTTGGAGGTGTAGGGCTCGATGCACTCATTGAA 1115381 Query 118220 ACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAG 118279 || | ||| || | |||||||| || ||||| || |||| || || |||||| || Sbjct 1115382 GCCGAGGATCTGCGAGGTGGAGGCCGTCGGCATCGGGGCCACCAGGAGCGAGTTACGCAG 1115441 Query 118280 ACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA---GTTGAGCTTTGTCTC 118336 || | |||||| ||||| || || |||| || | || | ||| | Sbjct 1115442 GCCATGACGAGCAATGCGCTCCTTCAGGCCGGCCCAATCCCACCGGTCGGAGGGGGTCAC 1115501 Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396 ||| |||| || |||||||| || || || || || ||||| | | | Sbjct 1115502 ACCC---CACAGGTCGAACTGGAGCTGGCCGGCCGAAGCCGGGGACCCCTCGTACGAGGC 1115558 Query 118397 ATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGT 118456 ||| ||||| | ||| ||| | | || |||||||| || ||| || || || Sbjct 1115559 ATACGGGCCGACGCGCTCGGCCGTCTGGCAGGACGCCTCGACCGCCGCGAAGTAGATGGT 1115618 Query 118457 TTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAA 118516 || || ||| || | || ||||| | || |||| | || || Sbjct 1115619 CTCGAAGATGGCCTTGTTGAGGGCACGCGCCTCCGGGCTCTCGAACGGCATGCGCATCAT 1115678 Query 118517 AATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGA 118576 || || | ||| || || || |||||||||| |||||| || || || | | || || Sbjct 1115679 GATGAACAGATCGGCCAGGCCCTGGACACCGATGCCAATCGGCCGGTGACGGAGGTTGGA 1115738 Query 118577 CTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGT 118636 ||||| || |||||| || || | || | ||||| | | || || || || Sbjct 1115739 GTTCCGGGCCTCCTCCACCGGGTAGTAGTTGATGTCGATGATGCGATCCAGGTTCCGGGC 1115798 Query 118637 GACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA--AC-TG---CGAGTCTCTT- 118689 || ||| |||| | ||||| || | ||| | || || | ||||| Sbjct 1115799 CACGACCCCGGTGACGGTGCGCAGCTTCTCAAAGTCATACGACATGGCCCCGGTCTCCGG 1115858 Query 118690 -CA----TTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATC 118744 || | || | ||| || ||||| || || ||||| || ||||| | ||| || Sbjct 1115859 GCAGGTGTGGATAAACTGCGGCAGGGCAATGGAGGCCAGGTTGCACACGGCCACCTCGTC 1115918 Query 118745 CTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTT 118804 || ||||||| | || || ||||| | ||| || | ||| ||||| || | ||| Sbjct 1115919 GTTGCTGGTGTACTGGACGATCTCGGTGCAGAGGTTCGAGCACTTGATGGTACCGAGGTT 1115978 Query 118805 CTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 118864 ||| || || ||||| ||| || ||||||||||| | ||| | || || || ||||| Sbjct 1115979 CTTCTGGTTGGACTTCTGGTTGCAGGCATCCTTGTACATGATGAAGGGGGTGCCGGTCTC 1116038 Query 118865 CGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGG--CACAGTGGCGTT---G 118919 | |||| || | || ||| | | || | |||||||| | || | || | Sbjct 1116039 CACCTGGGCCTCCATGAT---CTTGC-GCCA-CAGCAGCTGGGCCTTCATGACCTTGCGG 1116093 Query 118920 GCTCGCCCCTCTTCCTCGT-ACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTC 118978 || |||||||| ||||| || || |||||||| || ||||| || || | ||| Sbjct 1116094 GCACGCCCCTCGGACTCGTAACGCTG-GTAGAGGGTCTCGAACTCCTCGCCATAGCACTC 1116152 Query 118979 TGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCG 119038 || || || |||| |||||||| || ||||| | || || ||| || || Sbjct 1116153 GTGCAGGCCCGGGGCCTCGCGCGGGCAGAACAGCGACCAGTCGCCGCCGGACTCCACGCG 1116212 Query 119039 CTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTC 119098 ||||||||| || || || | ||| || || ||||||| || || |||| || || Sbjct 1116213 CTTCATGAAAAGATCCGGCACCCACAGGGCAAAGAAGAGGTCACGGGCACGAGTCTCCTC 1116272 Query 119099 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 119158 | || || |||| ||| | ||| | | |||||||||||| || ||||| Sbjct 1116273 GGCGCCGGTGTTCTTGCGCAGCTCGATGAAGGACTCCACATCCGCGTGCCAGGGCTCCAG 1116332 Query 119159 GTA------CACCGCGATTGACCCCTTACGACGACCAGCCTGGTTTACATACCTCGCAGT 119212 ||| | |||| | | ||| | | ||| |||||| || || | ||| || Sbjct 1116333 GTAGATGGCAAACGCGCCGGGGCGCTT--GTTG-CCACCCTGGTCGACGTAACGCGCGGT 1116389 Query 119213 GGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAAT 119272 ||| || || ||||| ||||| || | | || | ||| | |||||| || || ||| Sbjct 1116390 GGCATTGAACACACGCAGCATCGGGACCAGCCCGTTGGAGTAGCCATTGGTGCCGGCAAT 1116449 Query 119273 ACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGA 119332 ||| |||| | || | ||| | | | || || || || || ||| || Sbjct 1116450 GTAGGACCCGGTGGCGCGGATGTTGTGAACATTGAGGCCGATGCCGCCGGCGGTCTTGGA 1116509 Query 119333 GATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGC 119392 || | ||||||| || || |||| || ||||| |||||||| |||| | | Sbjct 1116510 AATGAGGGCGCACTGGCGCAGGGTGTCGTAAATGCCATCAATCGAGTCGTCCTTCATGGT 1116569 Query 119393 GATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGT 119452 || |||||||| ||||| || |||| ||| | ||| ||||||||| || || | Sbjct 1116570 GAGCAGGAAGCAAGACGACAGCTGCGGCCGGGGAGACCCACAGTTGAAGAGGGTCGGCGA 1116629 Query 119453 CGCGTGGATGAACATACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTC 119512 || || |||| | |||||||| | ||||||||||||| | ||||||| ||||| Sbjct 1116630 GGCATGCGTGAAGTAGCGCTGGGACATGTACTCGTAGGTCTCCAGGGCGGCGGGGATGTC 1116689 Query 119513 TTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 || || || |||| | || ||||| | |||||| || || Sbjct 1116690 GCTGCCATGGATGCCGACGGCCACGCGCATGATCATGTACTGCGG 1116734 >seq7 Length=2157034 Score = 161 bits (178), Expect = 1e-34 Identities = 358/532 (67%), Gaps = 4/532 (1%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || | | ||||| | ||||| Sbjct 326967 TAGTCACCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGACTGATCATGTCCATG 326908 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||||| | ||| | | | | |||| || | || || || || Sbjct 326907 AAGTCGAAGGGGTTCTCCGCGTTGTAGACCTTCGGGCAG-CCGAGCTCCACCAGCAGGCG 326849 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | || |||| ||||||| |||| ||| |||||| ||||| ||| | Sbjct 326848 GTCGGCCACAAACTCGATGTACTGGCACATGAGGTCGCCGTTCATGCCGATCAGGCGAAC 326789 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 || || || || || |||| ||||||| ||| |||| || || | | || |||| Sbjct 326788 GGGCAGGGCCTCGGTGAGGAACTCCTTCTCGATGACCACCGCCTCGCTGATGAGGGCGGT 326729 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAACTCCT 130025 ||||| || || || | | || | |||||| |||| | || || Sbjct 326728 GATGGTGGCCACGCTGGGCCGGGAGTTCAGGTGCGAGAAGAGCAGGCACG-CGAAGTCGC 326670 Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085 |||||| |||||||||||||||||||| ||||| |||| ||| || |||||||| | Sbjct 326669 AGTGGAGCCCCTCGTCACGGGAGATGAGCTCATTGCTGAAGGTCAGCCCGGGCATGAGGC 326610 Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 130145 | |||||||||| |||||| || || || ||||| |||||||| || |||||||| Sbjct 326609 CGCGCTTCTTCAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAAATGCCCTCCACGG 326550 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTCATCG 130205 ||||| || | || ||| || |||| | |||| || | ||| ||| | Sbjct 326549 CGGCGAAGGCCACCAGGCGCGTGGCGAAGGTGGACGACTCGTCCTCGATCCAGCGCATGG 326490 Query 130206 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 |||| | ||||| |||| || || |||| ||||| ||| || | ||||| Sbjct 326489 CCCAGTCGGCCTTCTTCTTGACGCAGGGGATGGTCTCGATGGCGCCGAAGAG 326438 >seq12 Length=745128 Score = 100 bits (110), Expect = 4e-16 Identities = 272/409 (67%), Gaps = 22/409 (5%) Strand=Plus/Minus Query 14069 AAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATG 14128 ||||| || || ||| ||||||| || || |||| || |||||| || | || | | Sbjct 118162 AAGCGCCCAGGCCGGCGGAGGGCATCATCCAGGACGTCCGCGCGGTTGGTACCGGCCAGG 118103 Query 14129 ACAACGATGCC--CGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGG 14186 |||| |||||| || | | | | ||||| |||||||| | || || |||| || Sbjct 118102 ACAATGATGCCATCGGCCGGGT--CGAAGCCGTCCATCTCCACGAGGATCTGGTTGAGGG 118045 Query 14187 TTTGTTCGCGTTCATCATTCGCAGGCATACCACCCGCA----CTGCGTTGCTTACCGACG 14242 | ||| | || || || || || | || || ||||| | |||| | Sbjct 118044 TGCTGTCGTGCTCGTCGTT----GGAATGGCTCCGGCGGTTGCTGCGCGACCGGCCGATG 117989 Query 14243 GCGTCAATTTCATCGATGAAAACGATACATGG---TTGATT-TTCACGGGCAACTTCAAA 14298 ||||| || ||||||||||||| ||| || || || || || ||| | || || Sbjct 117988 GCGTCGATCTCATCGATGAAAATGATGCAGGGGGTGTGCTTCTTGGCGGTC----TCGAA 117933 Query 14299 GATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCGGA 14358 || ||| ||||| | | |||||||| ||| ||||||| | || | | | |||| Sbjct 117932 GAGATCGCGCACACGGGCCGGCCCGACACCGACATACATCTCGATGAACTCCGAGCCGGA 117873 Query 14359 -ACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTCC 14417 ||| | || |||||| ||| || ||||| ||| |||| ||| || |||||||| | Sbjct 117872 GACACT-GAGGAAGGGAACGCCAGCCTCACCGGCGGTGGCCTTGGCCAGCAGGGTCTTAC 117814 Query 14418 CCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 | || || || ||| | || |||||||| || |||||| |||| || Sbjct 117813 CGGTACCCGGGGGCCCGGTCAGCAGGGCACCGCGGGGGATCTTGGCCCC 117765 >seq11 Length=637296 Score = 93.3 bits (102), Expect = 5e-14 Identities = 118/160 (74%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 179955 CTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAAC 180014 ||| || || || ||||| |||||||||| || || || || || || || | || Sbjct 467732 CTTGCCTCGCAGGGGGAAGACACCGTAGTAGTCGCGGCCGACGACGACCAGGCCGGACAC 467791 Query 180015 TGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTT-TCCAGATTGTG 180073 || |||| ||| || || ||||||||||||| |||||| || ||||| | |||| | Sbjct 467792 GGCCAGGGCCTTGGCCGAGTCACCCTCCGTCAGGATGAGGGTGCACTTGTGGGAATTGCG 467851 Query 180074 CCGTCCCTGCCTTGTTCGCGTCGTCCAACTTGGGAATACC 180113 ||| || |||| ||| |||||||||| |||||| || || Sbjct 467852 -CGTGCCGGCCTGGTTGGCGTCGTCCAGCTTGGGGATGCC 467890 Score = 91.5 bits (100), Expect = 2e-13 Identities = 263/400 (66%), Gaps = 6/400 (2%) Strand=Plus/Plus Query 178844 TGATGTCCTTGGGATTGAACGGTGGCACGTAGCAACTGAAACCCGTGCCGATGCCTTCGG 178903 |||||||| ||||||||| |||||| || | | || ||||||||||| || | Sbjct 466516 TGATGTCCAGGGGATTGAAGTTCGGCACGGAGGAGGACCACCCGGTGCCGATGCCCTCCG 466575 Query 178904 TTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAGTCTGGTTCAATCGCACGCC 178963 || || || || ||||| || || |||| ||| || || ||||| | | Sbjct 466576 ACCCATTGACCAGGACCATGGGCAGGACCGGCACATACCAGCGAGGCTCAATGCGAGTGC 466635 Query 178964 CGTCATCATCCAAATAATTGAGCACGGGGTCGTC--CCTCGGATCAAAGATTTTACGAGC 179021 | ||||| |||| || | |||| || ||| || ||||| | ||||| || || Sbjct 466636 CATCATCCTCCAGGTAGTGCAGCAGGGCGTCATCGGCCTCG--TGGAAGATCAGCCGCGC 466693 Query 179022 ATCCCTGGTGAGTTTTGTGAAGATGTACCTCGTTTGAGAC-GCATCTTTGCCACCCATGA 179080 || || || ||||| ||||| | || ||| | ||||| || || || | | Sbjct 466694 GGCCGGGGCCAGCACGGTGAAAATGTAACGCG-GCGAGGCGGCATCCTTCCCGCCATTCA 466752 Query 179081 GACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAACCCATGTAGT 179140 |||| || || || || | ||||| || ||||||| |||||| || || | |||| Sbjct 466753 GACGGGTACCGAACATGCCGCGCGGCTCCAGCAGATTGACATTGTTGGACCCGACATAGT 466812 Query 179141 CATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAAGCCGACT 179200 | | ||||| || || || | ||||| | || ||||| |||| ||||| | Sbjct 466813 CCTGGGCCATGCCGATGATGGTCATGGAAAGGGAAGCCTCGCCGTGCAGGTAGGCCGAAT 466872 Query 179201 TGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATCTC 179240 |||| |||||| || ||| ||| |||||||||| ||| Sbjct 466873 GCTCCGACACATAGCCCACCAGCTGGGCCACCTTCACCTC 466912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433545685840