Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fonticula_20alba_20[genbank_20GCA_5F000388065.2_202014-04-24] 214 sequences; 31,296,464 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq3 109 2e-19 >seq3 Length=3619281 Score = 109 bits (120), Expect = 2e-19 Identities = 185/262 (71%), Gaps = 12/262 (5%) Strand=Plus/Minus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTT--GGCTTCCAGG---TG 31059 |||||||||| || | |||| ||||| ||||| || ||| |||| ||| | Sbjct 1413067 CCATGCACATATGGCTGGCCTCGATGACGACACCCACCCCCAGCGGGCTG--AGGGCATT 1413010 Query 31060 CTCGAACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGC 31119 || || || | || ||||||||| | || || || ||||| || || ||||| || || Sbjct 1413009 CTGGACCA---CCTCGGCGATCTGGCCGGTCAGGCGCTCCTGGACCTGGAGGCGCCGGGC 1412953 Query 31120 ATACATGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGACCGTTCGGAATGTA 31179 | | ||||| | ||| | ||||||||||||||||| || | | || || |||||||| Sbjct 1412952 GCAAAGCTCCGCAATGCGTGCCAGCTTGCTCAGGCCCAGGACATGGCCATTGGGAATGTA 1412893 Query 31180 GCTGATCGTG-ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATGG 31238 || || | || ||| |||||||| || | ||||| |||||||| | || |||| Sbjct 1412892 GCCGA-CATGCACCCGGCCGAAGAAGGGAACCAGGTGGTGCTCGCAGAGGGAAAAGATCT 1412834 Query 31239 GGATGTCGCGCACCGTCACCAT 31260 |||||| || || | ||||| Sbjct 1412833 CGATGTCCCGGACGATGACCAT 1412812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187289124050304