Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq13 100 6e-16 seq26 89.7 1e-12 >seq13 Length=208297 Score = 100 bits (110), Expect = 6e-16 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 165716 CTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACG 165775 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 152787 CTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCGTGGGTTCGACCCCCACG 152728 >seq26 Length=183063 Score = 89.7 bits (98), Expect = 1e-12 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 230410 GAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTT-ATTGGCATGAACGCTGAACT 230468 ||||| ||||| |||||||| | ||| | || || || || || ||||| ||| | Sbjct 76971 GAAAAAGAGTTTATTTGTGAGTC-ATTACCGGTAGCATTGATAGGAATGAATAGTGATAT 76913 Query 230469 TATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAA 230528 ||| | ||||| || || || || || || || | || ||||| | || || ||||| Sbjct 76912 GATGAGTCAGTATATTGAGTTTGTTGCGGATCGTTTGTTGGTTGCTTTGGGATATGAGAA 76853 Query 230529 AGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGAC 230588 | | | | ||| || || |||| | ||||| |||||||| | |||| ||||| Sbjct 76852 ATATTTCCAGTCTCGAAATCCGTTTGATTGGATGGAACTCATTTCTTTGGAAGGAAAGAC 76793 Query 230589 CAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 |||||| || || ||||| || | || ||||| | | ||||||| |||| Sbjct 76792 CAACTTTTTTGAGAAGCGAGTGGGAGAATATCAAAAGGCTGGTGTAGTGAA 76742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818131390790