Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq9 98.7 9e-16 >seq9 Length=249065 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | || | |||||||||||| | ||||||||||||||||| ||||| || | Sbjct 144178 CCTCCCCTCAAACGCAACACCAAGTGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGAC 144119 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||| || | |||||| ||||| | || | ||| || || || || || Sbjct 144118 AAAGTACGGCCATCTTCCAACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGA 144059 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| ||||||||| ||| || || || | ||| | || || | | || || Sbjct 144058 ATGCCTTCCTTGTCTTGAATCTTAGACTTGACGTTTTCAATAGTATCTGAGGGTTCAACT 143999 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | || || || || ||||| || ||||| || ||||| Sbjct 143998 TCAAGAGTAATAGTCTTCCCAGTGAGAGTCTTCACAAATATTTGCAT 143952 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | || | |||||||||||| | ||||||||||||||||| || || || | Sbjct 144634 CCTCCCCTCAAACGCAACACCAAGTGAAGGGTAGACTCTTTTTGAATATTATAGTCTGAC 144575 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||| || | |||||| ||||| | || | ||| || || || || || Sbjct 144574 AAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGA 144515 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||||||| ||| || || || | ||| | || || | | || || Sbjct 144514 ATACCTTCCTTGTCTTGAATCTTGGACTTGACATTTTCAATAGTATCTGAGGGTTCAACT 144455 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || | || | || || || || ||||| || ||||| ||||||||| || Sbjct 144454 TCAAGAGTAATAGTCTTCCCAGTGAGAGTCTTCACAAATATCTGCATGCCT 144404 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | || | |||||||||||| | ||||||||||||||||| || || || | Sbjct 144406 CCTCCCCTCAAACGCAACACCAAGTGAAGGGTAGACTCTTTTTGAATATTATAGTCTGAC 144347 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||| || | |||||| ||||| | || | ||| || || || || || Sbjct 144346 AAAGTACGACCATCTTCCAACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGA 144287 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||||||| ||| || || || | ||| | || || | | || || Sbjct 144286 ATACCTTCCTTGTCTTGAATCTTAGACTTGACGTTTTCAATAGTATCTGAGGGTTCAACT 144227 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 || | || | || || || || ||||| || ||||| || |||||| || Sbjct 144226 TCAAGAGTAATAGTCTTCCCAGTGAGAGTCTTCACAAATATTTGCATGCCT 144176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828110595636