Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 3e-12 >seq4 Length=289758 Score = 87.8 bits (96), Expect = 3e-12 Identities = 145/209 (69%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 135637 GATCCTGTTTTGCATATAGAACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTA 135696 || || ||||||||||| || || ||| |||||| |||| ||| | || |||||| || Sbjct 40604 GACCCCGTTTTGCATATTGAGCTCCGGAAATGGGCAGATGCCTTTCTAATTGCGCCCATA 40545 Query 135697 ACGGCAAATACGTTAGCAAAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATT 135756 || || || |||||||| || || | ||||| ||| || | | || || Sbjct 40544 GATGCTAACACACTAGCAAAAGCTGCAGTAGGCCTTTGCGACAATCTAGTTTCCTCAGTT 40485 Query 135757 GTAAGAGCCTGGGA---TACAAACAAACCACTCATTTTCTGTCCTGCAATGAATACTCTT 135813 | ||||||||||| || ||||||||||| | | ||| || |||||||| | Sbjct 40484 ATTAGAGCCTGGGACAGTATGAACAAACCACTTTTAGTTGCTCCCGCTATGAATACGGTA 40425 Query 135814 ATGTGGGAACATCCTATTACAGAAAAACA 135842 ||||||||||| ||| | ||| | |||| Sbjct 40424 ATGTGGGAACAGCCTTTAACACATCAACA 40396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923191803197320